BO27586.complete Sequence
316 bp assembled on 2010-08-18
GenBank Submission: KX798764
> BO27586.complete
GAAGTTATCAGTCGACATGGCTGATATGGAGATACAGAGCAACAAAATGT
CAATAACGGAGGAAACACAAGTGCAGACGCGCAAGGAATGTGGAAAAAGG
GGACGAAAACCAGGAAGAAAGACGTCTACTGAAAAATTGGACATGAAAGC
CAAACTAGAACGCAGCAGACAAAGTGCCAGGGAATGCCGGGCGCGCAAGA
AGCTGCGGTATCAGTACCTGGAGGAACTGGTGGCGGATCGGGAGAAGGCT
GTAGTTGCTTTGCGTACGGAACTGGAGCGCGTCGTTAATTCAATGGAAGC
AAGCTTTCTAGACCAT
BO27586.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:39:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18619-RD | 285 | CG18619-PD | 1..282 | 17..298 | 1410 | 100 | Plus |
| CG18619-RC | 282 | CG18619-PC | 1..279 | 17..298 | 1330 | 98.9 | Plus |
| CG18619-RA | 357 | CG18619-PA | 1..264 | 17..280 | 1320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:39:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18619-RD | 634 | CG18619-RD | 84..365 | 17..298 | 1410 | 100 | Plus |
| CG18619-RC | 516 | CG18619-RC | 84..362 | 17..298 | 1330 | 98.9 | Plus |
| CG18619-RA | 512 | CG18619-RA | 84..347 | 17..280 | 1320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:39:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10264762..10264889 | 157..284 | 640 | 100 | Plus |
| 2L | 23513712 | 2L | 10264548..10264633 | 73..158 | 430 | 100 | Plus |
| 2L | 23513712 | 2L | 10264208..10264264 | 17..73 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:39:03 has no hits.
BO27586.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:17 Download gff for
BO27586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18619-RD | 78..359 | 17..300 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:52 Download gff for
BO27586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18619-RD | 84..365 | 17..300 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:46 Download gff for
BO27586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18619-RD | 84..365 | 17..300 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:46 Download gff for
BO27586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10264208..10264264 | 17..73 | 100 | -> | Plus |
| 2L | 10264549..10264633 | 74..158 | 100 | -> | Plus |
| 2L | 10264764..10264889 | 159..284 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:52 Download gff for
BO27586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10264208..10264264 | 17..73 | 100 | -> | Plus |
| arm_2L | 10264549..10264633 | 74..158 | 100 | -> | Plus |
| arm_2L | 10264764..10264889 | 159..284 | 100 | -> | Plus |
BO27586.pep Sequence
Translation from 16 to 316
> BO27586.pep
MADMEIQSNKMSITEETQVQTRKECGKRGRKPGRKTSTEKLDMKAKLERS
RQSARECRARKKLRYQYLEELVADREKAVVALRTELERVVNSMEASFLDH
BO27586.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18619-PD | 94 | CG18619-PD | 1..94 | 1..94 | 464 | 100 | Plus |
| CG18619-PC | 93 | CG18619-PC | 1..93 | 1..94 | 447 | 98.9 | Plus |
| CG18619-PA | 118 | CG18619-PA | 1..90 | 1..90 | 440 | 97.8 | Plus |
| CG18619-PB | 117 | CG18619-PB | 1..89 | 1..90 | 423 | 96.7 | Plus |
