BO27594.complete Sequence
1915 bp assembled on 2010-09-13
GenBank Submission: KX799142
> BO27594.complete
GAAGTTATCAGTCGACATGTGGAGGCACACGATCCAAAGTACCAGGTACC
TGGCAGGAAACGCCTCGCTTTGCAGGCAAATAGCGACGCACAGTCCCAAA
CTGGGGGCGGAAAGCAATCGCAGCAAGGAAAAGGCAAGTGAGAATGAGTC
CTTTATGGCCAACATCTTCCGTGGATCACTGGTGTCAAGCCAAGTGTTCC
CGTATCCGGATGTCCTGACCGCGGAGCAGAAGGAGCTGACCAACAGCCTG
ATAGATCCGTTCGAGCGTTTCTTCTCCGATGTCAATGACGCTGCCCGCAA
CGATGCCAACTCTAAAATAGATGACACCACTTCGACGGCTCTGTGGGAGC
TCGGGGCCTTCGGAATCCAAGTGCCATCTGAATTCGGTGGCCTCGGTCTG
AACAATACCCAGTACGGCAGGCTGTGCGCCATTGTGGGTGTCAACGATCT
GGGACTGGGCATCACGATTGGCGCCCATCAGAGTATTGGCTTCAAGGGAA
TACTGCTGTACGGCACCCCCGAGCAGAAGGAGAAGTACCTGCCCAAGGTG
GCCGCCGAGCAGGTGTACGCTGCCTTTGCCCTTACGGAACCCAGCTCCGG
ATCTGATGCGGGTTCCATTCGATGCCGTGCCGTGAAGAGTGCCGATGGAA
AGCACTACGTCCTTAATGGCTCAAAAATCTGGATTTCCAATGGCGGAATT
GCCGAAATTATGACCGTTTTCGCACAGACCGAGCAGGTGGACCCGAAGAC
TGGCGAGAAGAAGGACAAGGTCACTGCCTTCATTGTGGAACGATCCTTCG
GAGGTGTAACCAATGGACCACCGGAGAAGAAAATGGGCATCAAGGCATCG
AACACGGCCGAAGTGTATTTCGAAGATGTAAAGATTCCAATTGAAAATGT
GCTCGGCAAGGAAGGTGATGGATTCAAGGTTGCCATGAACATATTGAACA
ACGGTCGGTTTGGAATGGGCGCCACGCTATCGGGAACAATGAAGAAATGC
ATCGAACAGGCCACCGAGCATGCCAACAATCGAGTTCAGTTTGGTCAAAA
ACTAAAGAACTATGGATCCATCCAAGAGAAATTGGCTCAGATGAACATTC
TGCAGTACGCCACGGAGTCGATGGCGTTTACTATTTCACAAAACATGGAT
GCCGGCAGCAAGGACTATCACTTGGAAGCCGCCATCTCGAAGATCTATGC
TTCGGAGAGCGCGTGGTATGTTTGCGACGAGGCTATACAAATTCTGGGCG
GCATGGGATACATGGTGGATAATGGATTGGAACGAGTCCTGCGTGACCTG
CGCATTTTCCGCATATTCGAGGGCACCAATGACATTCTCCGGCTGTTCAT
TGCCCTGACTGGCATTCAATATGCGGGATCCCACCTTAAGGAACTGCAGC
GCGCATTCAAGAATCCCTCGGCCAATTTGGGACTGATTTTCAAAGAGGCC
TCCAGGCGGGCGGCCTCCACTGTCGGCTTGGGCGGCACCGATCTGAGTGG
CCACGTAGTGGGTGAACTCTTGCCTTATGCCAAAAAAACGGCCCATTGTA
TTGATCTTTTTGGACAATCGGTGGAAGAACTATTGCTGCGATACAACAAA
AACATAGTTAACGAACAAATTTTGCTAACACGACTGGCAAATGCAGCCAT
TGATATTTATGCAATGGTTGTGACGCAATCGCGATCATCCCGTGCAGTCA
ATCTGAATCTGCCAACTGCACAACACGAGCTCAACATGACCAAGGCACTC
ACTATTCAGGCATCTGATCGAGTGATTAAGAATCTACAGGCTGCCACATC
CAGTCATCATAGGTCTCTCAATGAGAAGATTTCCACCATCGCCAAGACCA
CTTTGGAAAATGGCGGTGTGACTACGACTGGAATCTTGGATCAAAACGCA
AGCTTTCTAGACCAT
BO27594.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:24:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7461-RC | 1884 | CG7461-PC | 1..1881 | 17..1897 | 9405 | 100 | Plus |
| CG7461-RB | 1884 | CG7461-PB | 1..1881 | 17..1897 | 9405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:24:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7461-RC | 2274 | CG7461-RC | 53..1933 | 17..1897 | 9405 | 100 | Plus |
| CG7461-RB | 2013 | CG7461-RB | 53..1933 | 17..1897 | 9405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:24:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19305224..19307104 | 17..1897 | 9405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:24:48 has no hits.
BO27594.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-16 10:43:33 Download gff for
BO27594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7461-RB | 62..1942 | 17..1899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:02 Download gff for
BO27594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7461-RB | 53..1933 | 17..1899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:17:38 Download gff for
BO27594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7461-RB | 53..1933 | 17..1899 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:17:38 Download gff for
BO27594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19305224..19307104 | 17..1899 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:02 Download gff for
BO27594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15192729..15194609 | 17..1899 | 99 | | Plus |
BO27594.pep Sequence
Translation from 16 to 1915
> BO27594.pep
MWRHTIQSTRYLAGNASLCRQIATHSPKLGAESNRSKEKASENESFMANI
FRGSLVSSQVFPYPDVLTAEQKELTNSLIDPFERFFSDVNDAARNDANSK
IDDTTSTALWELGAFGIQVPSEFGGLGLNNTQYGRLCAIVGVNDLGLGIT
IGAHQSIGFKGILLYGTPEQKEKYLPKVAAEQVYAAFALTEPSSGSDAGS
IRCRAVKSADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKD
KVTAFIVERSFGGVTNGPPEKKMGIKASNTAEVYFEDVKIPIENVLGKEG
DGFKVAMNILNNGRFGMGATLSGTMKKCIEQATEHANNRVQFGQKLKNYG
SIQEKLAQMNILQYATESMAFTISQNMDAGSKDYHLEAAISKIYASESAW
YVCDEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTNDILRLFIALTGI
QYAGSHLKELQRAFKNPSANLGLIFKEASRRAASTVGLGGTDLSGHVVGE
LLPYAKKTAHCIDLFGQSVEELLLRYNKNIVNEQILLTRLANAAIDIYAM
VVTQSRSSRAVNLNLPTAQHELNMTKALTIQASDRVIKNLQAATSSHHRS
LNEKISTIAKTTLENGGVTTTGILDQNASFLDH
BO27594.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:28:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7461-PC | 627 | CG7461-PC | 1..627 | 1..627 | 3185 | 100 | Plus |
| CG7461-PB | 627 | CG7461-PB | 1..627 | 1..627 | 3185 | 100 | Plus |
| Arc42-PA | 405 | CG4703-PA | 49..402 | 91..459 | 545 | 35.2 | Plus |
| CG3902-PA | 414 | CG3902-PA | 64..399 | 96..440 | 524 | 35.1 | Plus |
| CG12262-PA | 419 | CG12262-PA | 60..408 | 92..446 | 515 | 35.6 | Plus |
