BO27625.complete Sequence
676 bp assembled on 2010-08-18
GenBank Submission: KX794865
> BO27625.complete
GAAGTTATCAGTCGACATGTGCGCGAAATTCGTATGTGTAGTGCTGCTGG
CCAGCCTTGTGTGCGGTTCCATGGCCCTTCCCTCCCAGGACAACACCGAG
CGGGACCTGGTCAACATGCTGAACCGCTTAGACAGCGAGGAGTCCGTCGC
GCTGTTCGGCGGTCTGAGGATCGACCGGTCGGAGTCGGGCCGTAGCTTCG
GTGCATCCAAGGCCGTCGAGTCCTTCGAGGACCGCGCCGAGCGCTACCTG
GAGACCCACGAGCTAAACCTCTCCTTCTCCGGCGATGAGCAGGACGAGAA
CTCCGAGAACGAGTACACCGGACGCGCCATGGATGAGTCCCGCAGCAAGC
GCATGAAGAAGATGCTGCTGCCCCTTCTTTTGGCCCTGAAGCTGAAGAAG
GCCGTCGTTGTCAAGATTATGTTCACCATCATCAAGTTCATCTCGCTGAA
GGCTCTGGCCATCTCCTTCCTGGCCCTCATCCTGGCTGGTGCCACCTTCT
TCAAGGATCTGTTGGCCAAGAAGAAGGAACACATCACCACTGCCTACATC
ACCGGCAGCCCGCTGAACGCCGACATCGTGCACTCCGACTGGAGCCGCAA
TGGTCAGGCAGGTGCCGCCGATCTGGCCTACAACCACTATGGTCTGGCCC
AGCCCTTCGCAAGCTTTCTAGACCAT
BO27625.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:42:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi15-RA | 645 | CG1157-PA | 1..642 | 17..658 | 3210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi15-RA | 1232 | CG1157-RA | 110..751 | 17..658 | 3210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:42:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6301913..6302231 | 17..335 | 1595 | 100 | Plus |
| 3R | 32079331 | 3R | 6303002..6303172 | 488..658 | 855 | 100 | Plus |
| 3R | 32079331 | 3R | 6302791..6302947 | 335..491 | 785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:42:52 has no hits.
BO27625.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:15 Download gff for
BO27625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi15-RA | 108..749 | 17..660 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:18 Download gff for
BO27625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi15-RA | 110..751 | 17..660 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:00 Download gff for
BO27625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi15-RA | 110..751 | 17..660 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:00 Download gff for
BO27625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6301913..6302231 | 17..335 | 100 | -> | Plus |
| 3R | 6302792..6302944 | 336..488 | 100 | -> | Plus |
| 3R | 6303003..6303172 | 489..660 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:18 Download gff for
BO27625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2127635..2127953 | 17..335 | 100 | -> | Plus |
| arm_3R | 2128514..2128666 | 336..488 | 100 | -> | Plus |
| arm_3R | 2128725..2128894 | 489..660 | 98 | | Plus |
BO27625.pep Sequence
Translation from 16 to 676
> BO27625.pep
MCAKFVCVVLLASLVCGSMALPSQDNTERDLVNMLNRLDSEESVALFGGL
RIDRSESGRSFGASKAVESFEDRAERYLETHELNLSFSGDEQDENSENEY
TGRAMDESRSKRMKKMLLPLLLALKLKKAVVVKIMFTIIKFISLKALAIS
FLALILAGATFFKDLLAKKKEHITTAYITGSPLNADIVHSDWSRNGQAGA
ADLAYNHYGLAQPFASFLDH
BO27625.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:23:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi15-PA | 214 | CG1157-PA | 1..214 | 1..214 | 1069 | 100 | Plus |
| Osi9-PA | 233 | CG15592-PA | 3..197 | 4..172 | 155 | 30.3 | Plus |
