BO27628.complete Sequence
781 bp assembled on 2010-08-18
GenBank Submission: KX798494
> BO27628.complete
GAAGTTATCAGTCGACATGGCTAAAATCTTAATCAGTGCTCTATTGTGCG
TTGCCATGTTTGGCTCAATGGCTCTTGGCTCGCCGGAATGCCCCACGCCC
AATGGACGATTTGCATCGGGTGACCAGTGCGACTCTTACACAGAGTGTCA
GGATGGTACTCCCGTGGAGAAGCTGTGTCCGGACGGCCTGCTCTTCCACC
AGCGCACCAAGGCGACCGGAGAGTGCACATACGCCCCGTACTCCACCTGC
AAGGAGAGGGCTCGCCTGCAGCCCGCCAACGGAACGGAGGAGTGTCCCCG
CCAGTTCGGCTTCTATCCGAACGGAGATGCGACCAAGTGCGGCGTCTATC
GCAACTGCGCCCACGGCGTGGCCAGCCTAACCAAGTGCCCCGAGGGCCTG
GCGTTCAACGAGGAGACCTACCAGTGCGACTGGCCCGATCTAGTGGAAAG
TTGCAACGCCGAGGCGTACCTGGGCTTCAATTGCCCCGCCGCCGATTCCG
CCGATGATAGCGCTGCCGCCGCCGTGGATGTCAGCCCGGAGGGTGAGCTG
CGCTACTATCGCCATCCCCAGACCTGCAAGAAGTACTTCGTGTGCGTCAA
CGGACATCCGCGCCTGTACAACTGCGGCAAGTATCTGGCCTTCAACTCGC
AGACGAAACTGTGCGACTTCTACAACAAGGTGCCCGAGTGCTATGCCCTG
CTCAAGGAGAAGCAGCGCCTGAAGGCGGAGAAGCAACAGCCCCAGGTGGC
TCAGCCGGAGGACGCAAGCTTTCTAGACCAT
BO27628.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:42:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-E-RB | 750 | CG11142-PB | 1..747 | 17..763 | 3735 | 100 | Plus |
| obst-E-RA | 729 | CG11142-PA | 1..57 | 17..73 | 285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-E-RB | 998 | CG11142-RB | 128..874 | 17..763 | 3735 | 100 | Plus |
| obst-E-RA | 994 | CG11142-RA | 128..184 | 17..73 | 285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5762677..5763369 | 763..71 | 3465 | 100 | Minus |
| 2L | 23513712 | 2L | 5765961..5766015 | 71..17 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:42:41 has no hits.
BO27628.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:12 Download gff for
BO27628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-E-RB | 127..873 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:14 Download gff for
BO27628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-E-RB | 128..874 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:55 Download gff for
BO27628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-E-RB | 128..874 | 17..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:55 Download gff for
BO27628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5762675..5763368 | 72..765 | 99 | <- | Minus |
| 2L | 5765961..5766015 | 17..71 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:14 Download gff for
BO27628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5762675..5763368 | 72..765 | 99 | <- | Minus |
| arm_2L | 5765961..5766015 | 17..71 | 100 | | Minus |
BO27628.pep Sequence
Translation from 16 to 781
> BO27628.pep
MAKILISALLCVAMFGSMALGSPECPTPNGRFASGDQCDSYTECQDGTPV
EKLCPDGLLFHQRTKATGECTYAPYSTCKERARLQPANGTEECPRQFGFY
PNGDATKCGVYRNCAHGVASLTKCPEGLAFNEETYQCDWPDLVESCNAEA
YLGFNCPAADSADDSAAAAVDVSPEGELRYYRHPQTCKKYFVCVNGHPRL
YNCGKYLAFNSQTKLCDFYNKVPECYALLKEKQRLKAEKQQPQVAQPEDA
SFLDH
BO27628.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-E-PB | 249 | CG11142-PB | 1..249 | 1..249 | 1384 | 100 | Plus |
| obst-E-PA | 242 | CG11142-PA | 1..228 | 1..232 | 564 | 48.9 | Plus |
| obst-A-PB | 237 | CG17052-PB | 8..225 | 6..225 | 384 | 38.1 | Plus |
| obst-A-PA | 237 | CG17052-PA | 8..225 | 6..225 | 384 | 38.1 | Plus |
| obst-B-PA | 337 | CG4778-PA | 85..285 | 24..232 | 337 | 33.5 | Plus |
