Clone BO27631 Report

Search the DGRC for BO27631

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:276
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG32302-RA
Protein status:BO27631.pep: Imported from assembly
Sequenced Size:973

Clone Sequence Records

BO27631.complete Sequence

973 bp assembled on 2010-08-18

GenBank Submission: KX794201

> BO27631.complete
GAAGTTATCAGTCGACATGAGGTCTTCAGTACCGGTTTGTCTAATCCTGC
TCGCTCTGGCGTTGGGATCGGCGTGGGCTAATGATAATCCCTGCCAGGAT
GTGCGCATTCCCGGCTTCGTTTGCATGAACTGCACCACCTTGGGCTACTG
CATCCGCGATGCCACCGGCAGCTGGGAAACGATTTCGATGCTGGGCTGCC
AATCGGAGTACAATTTCTATTGCAGCGACGAGGGTACCTTCGGATGCACC
TTCCAGTCGCAGTGCCAGGTGCCCAAGAGAGGTCCCTTCAGCTGTCAGCA
GGCGGGCCTGTTCCCGGATCCGTACGACTGTAGGCGGTACCACGAGTGCA
GCGATCAGAGTGTGGACACCCCTCGCATCTGCTCCAACGGAGCGGGCTAC
TCCACACTCACGGGCACTTGTGTTCTGCCACGGGAGAGTGAGCAGTGCAT
CCAGGAGCAGTTCACCTGCAGTCGGTCGGGACAAGTGGGTGGATGGGCGC
CCGACAATCGGTACTTCTACGTCTGCGTCAATGACACGGCCAATTCGCTG
TATCCGCTGATGATGAAGTGCCACGAGGGATTCGTTTTCAACAGCTACAG
CTGTGTGCCCGACACCAGGAGCATGAGGAGCATTCAGGCGATGGAGTCCC
ACACGTGCATGAACAACGATAGGTACCAATGCCCCTTCCGAACCTCTGAG
ATCGAGTACTGCAAGTGCGTCGATGGAGAACTGGAGGTGATGACCTGTCC
CGCCGGCTTCCAAATTGATCCTAAGATCCTGACCTGCGTGACTGATAGGA
TCTATCAGTGCTCGGACTTTGAGATCCTCAGCTGTCCCAATGTCTCCACC
AAGGATGAGTACTGCATATGCATCGATCACCAGCTGCAGATCTACAGCTG
TCCAATGGGACAGTATTTCAATGCTGAGACTCGAAAGTGCCAATCAGAGT
CAGAGGCAAGCTTTCTAGACCAT

BO27631.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG32302-RA 942 CG32302-PA 1..939 17..955 4695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG32302-RA 1079 CG32302-RA 16..954 17..955 4695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:42:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2268840..2269778 17..955 4695 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:42:36 has no hits.

BO27631.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:10 Download gff for BO27631.complete
Subject Subject Range Query Range Percent Splice Strand
CG32302-RA 14..952 17..957 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:13 Download gff for BO27631.complete
Subject Subject Range Query Range Percent Splice Strand
CG32302-RA 16..954 17..957 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:54 Download gff for BO27631.complete
Subject Subject Range Query Range Percent Splice Strand
CG32302-RA 16..954 17..957 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:54 Download gff for BO27631.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2268840..2269778 17..957 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:13 Download gff for BO27631.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2268840..2269778 17..957 99   Plus

BO27631.pep Sequence

Translation from 16 to 973

> BO27631.pep
MRSSVPVCLILLALALGSAWANDNPCQDVRIPGFVCMNCTTLGYCIRDAT
GSWETISMLGCQSEYNFYCSDEGTFGCTFQSQCQVPKRGPFSCQQAGLFP
DPYDCRRYHECSDQSVDTPRICSNGAGYSTLTGTCVLPRESEQCIQEQFT
CSRSGQVGGWAPDNRYFYVCVNDTANSLYPLMMKCHEGFVFNSYSCVPDT
RSMRSIQAMESHTCMNNDRYQCPFRTSEIEYCKCVDGELEVMTCPAGFQI
DPKILTCVTDRIYQCSDFEILSCPNVSTKDEYCICIDHQLQIYSCPMGQY
FNAETRKCQSESEASFLDH

BO27631.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG32302-PA 313 CG32302-PA 1..313 1..313 1761 100 Plus
CG13806-PA 297 CG13806-PA 35..293 24..258 301 28.7 Plus
obst-I-PA 219 CG32304-PA 38..154 195..308 177 31.6 Plus