BO27631.complete Sequence
973 bp assembled on 2010-08-18
GenBank Submission: KX794201
> BO27631.complete
GAAGTTATCAGTCGACATGAGGTCTTCAGTACCGGTTTGTCTAATCCTGC
TCGCTCTGGCGTTGGGATCGGCGTGGGCTAATGATAATCCCTGCCAGGAT
GTGCGCATTCCCGGCTTCGTTTGCATGAACTGCACCACCTTGGGCTACTG
CATCCGCGATGCCACCGGCAGCTGGGAAACGATTTCGATGCTGGGCTGCC
AATCGGAGTACAATTTCTATTGCAGCGACGAGGGTACCTTCGGATGCACC
TTCCAGTCGCAGTGCCAGGTGCCCAAGAGAGGTCCCTTCAGCTGTCAGCA
GGCGGGCCTGTTCCCGGATCCGTACGACTGTAGGCGGTACCACGAGTGCA
GCGATCAGAGTGTGGACACCCCTCGCATCTGCTCCAACGGAGCGGGCTAC
TCCACACTCACGGGCACTTGTGTTCTGCCACGGGAGAGTGAGCAGTGCAT
CCAGGAGCAGTTCACCTGCAGTCGGTCGGGACAAGTGGGTGGATGGGCGC
CCGACAATCGGTACTTCTACGTCTGCGTCAATGACACGGCCAATTCGCTG
TATCCGCTGATGATGAAGTGCCACGAGGGATTCGTTTTCAACAGCTACAG
CTGTGTGCCCGACACCAGGAGCATGAGGAGCATTCAGGCGATGGAGTCCC
ACACGTGCATGAACAACGATAGGTACCAATGCCCCTTCCGAACCTCTGAG
ATCGAGTACTGCAAGTGCGTCGATGGAGAACTGGAGGTGATGACCTGTCC
CGCCGGCTTCCAAATTGATCCTAAGATCCTGACCTGCGTGACTGATAGGA
TCTATCAGTGCTCGGACTTTGAGATCCTCAGCTGTCCCAATGTCTCCACC
AAGGATGAGTACTGCATATGCATCGATCACCAGCTGCAGATCTACAGCTG
TCCAATGGGACAGTATTTCAATGCTGAGACTCGAAAGTGCCAATCAGAGT
CAGAGGCAAGCTTTCTAGACCAT
BO27631.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:42:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32302-RA | 942 | CG32302-PA | 1..939 | 17..955 | 4695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32302-RA | 1079 | CG32302-RA | 16..954 | 17..955 | 4695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:42:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2268840..2269778 | 17..955 | 4695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:42:36 has no hits.
BO27631.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:10 Download gff for
BO27631.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32302-RA | 14..952 | 17..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:13 Download gff for
BO27631.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32302-RA | 16..954 | 17..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:54 Download gff for
BO27631.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32302-RA | 16..954 | 17..957 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:54 Download gff for
BO27631.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2268840..2269778 | 17..957 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:13 Download gff for
BO27631.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2268840..2269778 | 17..957 | 99 | | Plus |
BO27631.pep Sequence
Translation from 16 to 973
> BO27631.pep
MRSSVPVCLILLALALGSAWANDNPCQDVRIPGFVCMNCTTLGYCIRDAT
GSWETISMLGCQSEYNFYCSDEGTFGCTFQSQCQVPKRGPFSCQQAGLFP
DPYDCRRYHECSDQSVDTPRICSNGAGYSTLTGTCVLPRESEQCIQEQFT
CSRSGQVGGWAPDNRYFYVCVNDTANSLYPLMMKCHEGFVFNSYSCVPDT
RSMRSIQAMESHTCMNNDRYQCPFRTSEIEYCKCVDGELEVMTCPAGFQI
DPKILTCVTDRIYQCSDFEILSCPNVSTKDEYCICIDHQLQIYSCPMGQY
FNAETRKCQSESEASFLDH
BO27631.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32302-PA | 313 | CG32302-PA | 1..313 | 1..313 | 1761 | 100 | Plus |
CG13806-PA | 297 | CG13806-PA | 35..293 | 24..258 | 301 | 28.7 | Plus |
obst-I-PA | 219 | CG32304-PA | 38..154 | 195..308 | 177 | 31.6 | Plus |