BO27702.complete Sequence
886 bp assembled on 2010-09-23
GenBank Submission: KX794606
> BO27702.complete
GAAGTTATCAGTCGACATGAAGTACATTTCGTATTTGCTAGTTTCTTCTA
TAATTGCCAACCAACTTCTCTATGGACTGGCCGTTTTACTTGAACCCAAT
TGTGGCCAAATACCTTTTCGAATGCGCATTTTTGGCGGAATGGATGCTGG
GTTAGTCTCAACACCATGGATGGCTTTTCTGCACAATCACTTACAGTTCC
TGTGCGGCGGCTCACTTATCACGAGCGAATTCGTGCTTACCGCTGCGCAT
TGTGTGATGCCCACTCCGAAAAACTTAACGGTTCGACTGGGAGAGTATGA
TTGGACAAGACAAATGGATTCCATTAACCCGAAACACAGGCACAGGGAAT
ACATGGTAACTAGAATCTATACGCATCCCAGTTATAGGTCGATTGCAGCC
TATGATATAGCATTACTGAAACTGAATCAGACAGTTGAATATACAGTTGC
CATTCGTCCCATATGTTTGGTATTGCCTGAAAATTTCCACGAATGGTATT
GGCTTGTGGATTCTGTAGAAGACTTCACTCTTACCGGCTGGGGTGCGACC
AAAACTGAACCTGTTAGCCAAGTACTCCAATCCGCCAATCTCACCCAGAT
CGATCGGGGAACCTGTCACGATCGGTACGGACATTCTGTCGATCATACCC
ACATCTGTGCCGGAAGTAGCAAATCATTTGCCTGCGTCGGGGACTCTGGC
AGTCCACTTGCAATGAAGGTGGTGCATAATCGAAGATACATTCACGCTCA
AGTGGGAATTGTTAGCCGTGGGCCCAAGAATTGTGATGGAGTTACTGTCT
TCACAAACGTTGTAAGCTTCACCGAGTGGATTTTCAGGACCACTTTATAC
GACGCGAAATACATGTCCGCAAGCTTTCTAGACCAT
BO27702.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:03:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33459-RA | 855 | CG33459-PA | 1..852 | 17..868 | 4260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:03:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33459-RA | 914 | CG33459-RA | 12..863 | 17..868 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:03:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16488705..16489131 | 442..868 | 2135 | 100 | Plus |
| 2R | 25286936 | 2R | 16488064..16488274 | 17..227 | 1055 | 100 | Plus |
| 2R | 25286936 | 2R | 16488470..16488639 | 277..446 | 850 | 100 | Plus |
| 2R | 25286936 | 2R | 16488354..16488403 | 227..276 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:03:56 has no hits.
BO27702.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-23 10:59:04 Download gff for
BO27702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33459-RA | 1..852 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:02 Download gff for
BO27702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33459-RA | 12..863 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:10:01 Download gff for
BO27702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33459-RA | 12..863 | 17..870 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:10:01 Download gff for
BO27702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16488064..16488274 | 17..227 | 100 | -> | Plus |
| 2R | 16488355..16488403 | 228..276 | 100 | -> | Plus |
| 2R | 16488470..16488639 | 277..446 | 100 | -> | Plus |
| 2R | 16488710..16489131 | 447..870 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:02 Download gff for
BO27702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12375569..12375779 | 17..227 | 100 | -> | Plus |
| arm_2R | 12375860..12375908 | 228..276 | 100 | -> | Plus |
| arm_2R | 12375975..12376144 | 277..446 | 100 | -> | Plus |
| arm_2R | 12376215..12376636 | 447..870 | 99 | | Plus |
BO27702.pep Sequence
Translation from 16 to 886
> BO27702.pep
MKYISYLLVSSIIANQLLYGLAVLLEPNCGQIPFRMRIFGGMDAGLVSTP
WMAFLHNHLQFLCGGSLITSEFVLTAAHCVMPTPKNLTVRLGEYDWTRQM
DSINPKHRHREYMVTRIYTHPSYRSIAAYDIALLKLNQTVEYTVAIRPIC
LVLPENFHEWYWLVDSVEDFTLTGWGATKTEPVSQVLQSANLTQIDRGTC
HDRYGHSVDHTHICAGSSKSFACVGDSGSPLAMKVVHNRRYIHAQVGIVS
RGPKNCDGVTVFTNVVSFTEWIFRTTLYDAKYMSASFLDH
BO27702.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:33:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33459-PA | 284 | CG33459-PA | 1..284 | 1..284 | 1526 | 100 | Plus |
| CG33458-PA | 281 | CG33458-PA | 1..276 | 1..277 | 575 | 44.8 | Plus |
| CG30090-PA | 291 | CG30090-PA | 25..273 | 25..272 | 445 | 41.7 | Plus |
| CG30287-PA | 284 | CG30287-PA | 25..277 | 24..272 | 436 | 40.5 | Plus |
| CG33226-PC | 292 | CG33226-PC | 10..282 | 4..272 | 434 | 38.4 | Plus |
