BO27705.complete Sequence
2929 bp assembled on 2010-10-15
GenBank Submission: KX795999
> BO27705.complete
GAAGTTATCAGTCGACATGGCCAGCGTATGGAAGCGATTGCAGCGCAATT
TCAAGCGAGCCGCCAAATTCCAGTTCACCGCATCGTACCACGATCTGCAT
CTGGAAACCACCGCCAAGTGGCGGCCGTCGAACCTCTCTATCGTTTGGAC
CAGAAGATCTAGACGAGTGGCCAGTGCTCCTTTGCCATGGGAGCCGGACA
TGATGAACCCCTTGGTGGGCAATATATCCTGGCCAGTGCCCGACAATCAC
ACCATATCCGTCACCCTGTTTAAGGATCCTCGGACACACGAGCTGGAGGA
CAAGGACTGGACGTTTGTCATCGAAGATGTCACTCCAATGGGCAAGAAAC
GTGTGCTGGCCAATGCCAGCATTAATATGAGGAAGTATGCCAGCATAGAA
TCCACTCAGCAGAGCTTTACCTTGAGCCTAAAGCCAGTCTCGAAGAAGAT
TACTGCAGCCAGTTTGGAGCTCACGATTAGCTGTGTATTTTTGCGAGAAG
GAAAGGCTACAGACGAGGACATGCAGAGCGTTGTCTCCATGATGTCCGTG
AACAACAATGATGTGGCGCCTTTGGATGACTTGGAGGATATTCCAGATCT
TGATGGCTTTAGTGAAATTACGGACAATTTTAATGACTTTACACAGCAAC
TGGAGCATATGACAACTAGCCTAAATGGCTGCATTGATGTGGCCACGCCT
CAAAGTGACGCCGACGGCAAGCGGGAAGCTGCTAACAAGTTAGACTTGCC
CACAGCTGCATCCGGTGGTTCTAGTGGTGCTGAAGAGTCCCTGAAAACGC
CGAATGGATTGCAGCATGTGGTGGACCAAACGCCAATAAAGTCACCAGAT
GAAGTAAAGCAGCCAAAGCAGACGCCGGTGGAGTCATTGAGGTCCAAAAC
TAACGAGGACTTTGACAAAATGGTCACCTCAACGCCACTCGAACCCAACG
TAAACAAGGATGATGTGAAGCCAAAGAAGAAGAGGGCTTTATTCTTCACT
GAGAAGGAGGATGAGCAGGACTTAAGGGTGGAAAGTGTGAAGGAGGATAC
CACCAAGACTATCGGCGACAACAGCACCACTAAGGAAAAGCCCAAAGAAG
AAAGCCAATCCAGTAAGGATGCCTCATCCGTGGTGGTTCCGAGTGCCAAG
CGCCCTGAACTGCAGCCCCTAAATCTAAAGAAGAGTTACGAACCCTCGCA
GACACCTGAATCCGCACCCGTACCCGCATCTGTGATAAACGAATCGATTG
GATCGTGCTTTAGTACGTCTGGCTCGTTGAACAACAGCCTTAAGCCGGTG
GAGAAGATCGTGCTGAAGGAGAACACGCCCGGGCAGGATCTGCTGGAGTG
GTGCAAAGAAGTTACCAAAGACTACCCCAATGTTAAGGTTACCAACCTGA
CGACCAGCTGGCGCAACGGCATGGCCTTCTGCGCTATTATTCATCATTTT
GTGCCGGAGCTCATTGACATGTCTAAGCTGAGCGCCCATGACGTAGTTGG
CAATTGTCGAATTGGCTTCGATGCGGCGGAATCATTAGGAATACCTCGTG
TAATCGAGCCGCGCGACATGAATATGCTCACGGTACCGGACAAGTTGGCC
GTGATGACCTATTTGCATCAGTTGCGGGCGCACTTTACCGGCAAGCAGCT
AAAAATTGAGCAAATCGGTTCAACGGCAGACGAGTCGAGCTACGTTATTG
GAGACTACAAGTCGGACAATTTGTCGCAGAATCGCATTAACTTTTCGCAC
CCCAAGTCGTTGTTGCTGCATCAAAACTCATTCGATGAGGAGATAAATGG
TTCAAATAAATCGGAGCAACTTTCACCCACAAGCAAAAAGGATGTGAAGA
ATTTGATTCTGTACAACTCGAAGAATATTCTGGACAAGGTGCTGTCGCCC
ACCAAGGACAAGAACTCGATCAACGCATCGCAGCATGCAAATCAATCGCC
GATGTTGAGCTGCCAGACAACACCGCCGCAGGATGAATCACTGGATAAAG
GGTCACAACCGGGTGGCAAGGAGAACAGCTCCATAACCACCATTGATCCG
CAGGCGGCCAGTCGAATTTTAACGCGCCACAAGATGATGAGCGAAAAAGC
CAAGCTGATGATGGAAAAGCGAAAGCTTAACAAAACCAGCGACGCGAACG
ACGAGGAGAGGCAGCAGCGTCTGCTGGAACAGGCTCGTCGCCTTATCCTG
GAGACTCGTGTGAAGAGCGGTGGTTCCATCGAGAGTCCCACCAGGCCCAA
GCTGGAGCGCACCATCTCGCCGATCCACAACGGAGCCGAGGAATTCTATG
CGGAGCACGCGAAAAAGCTGGAGCTTAAGGAGCCAGGCAGTCCTAGTCAT
AGGTTAAGTGATCCGAAGGTCCTACAGTCCTTCAACGCAATCGTGGAGCG
CGTCTCACCAAAGCACGAGAAGAGGGGTGACAAGCTGTCCTACATCGATT
CCGAGCTGGAGGCCCTGGAGCGGGAGCAGGAGGCTATCGACCAGAAGGCC
AGCAATCTGGAGGCCAAGCTGCGCGCCGTAATGGGCGGCAATCCAAAGAC
CGAGGAGACAGAGGAGCAACTGCTATCGCAATGGTTTACGCTGGTCAACA
AGAAGAACGCACTCCTCCGGCGACAGATGCAGCTAAATATACTCGAGCAA
GAAAAAGATTTGGAGCGAAAATATACAATGCTTAATCAAGAGCTGCGGGC
GGCGCAATCTGTGGAAGATTGGCGCAAAACGGAAGTTCAGCGTGAAAAGG
AGCGACTGCTGCTCGAGGAACTGATGACGATTGTCGACAAGCGCGACCAG
TTGGTTCAGCACTTGCACAACCAAGAGATAGCGATCGAAGACGACCAGGA
GATCGCGAGGAAACTGGAGCACGTGGACATCAGTGCTGAAAAAGACAAAT
GTGTTCTTCAAGCAAGCTTTCTAGACCAT
BO27705.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:01:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ehbp1-RG | 2898 | CG15609-PG | 1..2895 | 17..2911 | 14475 | 100 | Plus |
| Ehbp1-RB | 2964 | CG15609-PB | 757..2961 | 707..2911 | 11025 | 100 | Plus |
| Ehbp1-RI | 2985 | CG15609-PI | 757..2982 | 707..2911 | 10780 | 99.1 | Plus |
| Ehbp1-RB | 2964 | CG15609-PB | 1..691 | 17..707 | 3455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:01:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ehbp1-RG | 3829 | CG15609-RG | 383..3277 | 17..2911 | 14475 | 100 | Plus |
| Ehbp1-RB | 3864 | CG15609-RB | 1108..3312 | 707..2911 | 11025 | 100 | Plus |
| Ehbp1-RI | 4152 | CG15609-RI | 1143..3368 | 707..2911 | 10780 | 99.1 | Plus |
| Ehbp1-RB | 3864 | CG15609-RB | 352..1042 | 17..707 | 3455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:01:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17011952..17012709 | 1464..707 | 3790 | 100 | Minus |
| 2R | 25286936 | 2R | 17011154..17011549 | 2062..1667 | 1980 | 100 | Minus |
| 2R | 25286936 | 2R | 17010262..17010535 | 2426..2153 | 1370 | 100 | Minus |
| 2R | 25286936 | 2R | 17013787..17013997 | 330..120 | 1055 | 100 | Minus |
| 2R | 25286936 | 2R | 17011612..17011816 | 1669..1465 | 1025 | 100 | Minus |
| 2R | 25286936 | 2R | 17013285..17013481 | 707..511 | 985 | 100 | Minus |
| 2R | 25286936 | 2R | 17008596..17008785 | 2833..2644 | 950 | 100 | Minus |
| 2R | 25286936 | 2R | 17013546..17013727 | 510..329 | 910 | 100 | Minus |
| 2R | 25286936 | 2R | 17010053..17010174 | 2546..2425 | 610 | 100 | Minus |
| 2R | 25286936 | 2R | 17014948..17015052 | 121..17 | 525 | 100 | Minus |
| 2R | 25286936 | 2R | 17008846..17008942 | 2643..2547 | 485 | 100 | Minus |
| 2R | 25286936 | 2R | 17010886..17010976 | 2153..2063 | 455 | 100 | Minus |
| 2R | 25286936 | 2R | 17008458..17008536 | 2911..2833 | 395 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 15:01:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| micropia | 5461 | micropia DMDM11 5461bp | 339..375 | 854..890 | 122 | 81.1 | Plus |
| micropia | 5461 | micropia DMDM11 5461bp | 5324..5360 | 854..890 | 122 | 81.1 | Plus |
BO27705.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-15 09:22:59 Download gff for
BO27705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15609-RG | 375..3269 | 17..2913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:28:15 Download gff for
BO27705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ehbp1-RG | 383..3277 | 17..2913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:01 Download gff for
BO27705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ehbp1-RG | 383..3277 | 17..2913 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:01 Download gff for
BO27705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17008456..17008536 | 2833..2913 | 97 | <- | Minus |
| 2R | 17008597..17008785 | 2644..2832 | 100 | <- | Minus |
| 2R | 17008846..17008942 | 2547..2643 | 100 | <- | Minus |
| 2R | 17010053..17010173 | 2426..2546 | 100 | <- | Minus |
| 2R | 17010263..17010535 | 2153..2425 | 100 | <- | Minus |
| 2R | 17010887..17010976 | 2063..2152 | 100 | <- | Minus |
| 2R | 17011154..17011548 | 1668..2062 | 100 | <- | Minus |
| 2R | 17011614..17011816 | 1465..1667 | 100 | <- | Minus |
| 2R | 17011952..17012708 | 708..1464 | 100 | <- | Minus |
| 2R | 17013285..17013481 | 511..707 | 100 | <- | Minus |
| 2R | 17013546..17013727 | 329..510 | 100 | <- | Minus |
| 2R | 17013789..17013996 | 121..328 | 100 | <- | Minus |
| 2R | 17014949..17015052 | 17..120 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:28:15 Download gff for
BO27705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12895961..12896041 | 2833..2913 | 97 | <- | Minus |
| arm_2R | 12896102..12896290 | 2644..2832 | 100 | <- | Minus |
| arm_2R | 12896351..12896447 | 2547..2643 | 100 | <- | Minus |
| arm_2R | 12897558..12897678 | 2426..2546 | 100 | <- | Minus |
| arm_2R | 12897768..12898040 | 2153..2425 | 100 | <- | Minus |
| arm_2R | 12898392..12898481 | 2063..2152 | 100 | <- | Minus |
| arm_2R | 12898659..12899053 | 1668..2062 | 100 | <- | Minus |
| arm_2R | 12899119..12899321 | 1465..1667 | 100 | <- | Minus |
| arm_2R | 12899457..12900213 | 708..1464 | 100 | <- | Minus |
| arm_2R | 12900790..12900986 | 511..707 | 100 | <- | Minus |
| arm_2R | 12901051..12901232 | 329..510 | 100 | <- | Minus |
| arm_2R | 12901294..12901501 | 121..328 | 100 | <- | Minus |
| arm_2R | 12902454..12902557 | 17..120 | 100 | | Minus |
BO27705.pep Sequence
Translation from 16 to 2929
> BO27705.pep
MASVWKRLQRNFKRAAKFQFTASYHDLHLETTAKWRPSNLSIVWTRRSRR
VASAPLPWEPDMMNPLVGNISWPVPDNHTISVTLFKDPRTHELEDKDWTF
VIEDVTPMGKKRVLANASINMRKYASIESTQQSFTLSLKPVSKKITAASL
ELTISCVFLREGKATDEDMQSVVSMMSVNNNDVAPLDDLEDIPDLDGFSE
ITDNFNDFTQQLEHMTTSLNGCIDVATPQSDADGKREAANKLDLPTAASG
GSSGAEESLKTPNGLQHVVDQTPIKSPDEVKQPKQTPVESLRSKTNEDFD
KMVTSTPLEPNVNKDDVKPKKKRALFFTEKEDEQDLRVESVKEDTTKTIG
DNSTTKEKPKEESQSSKDASSVVVPSAKRPELQPLNLKKSYEPSQTPESA
PVPASVINESIGSCFSTSGSLNNSLKPVEKIVLKENTPGQDLLEWCKEVT
KDYPNVKVTNLTTSWRNGMAFCAIIHHFVPELIDMSKLSAHDVVGNCRIG
FDAAESLGIPRVIEPRDMNMLTVPDKLAVMTYLHQLRAHFTGKQLKIEQI
GSTADESSYVIGDYKSDNLSQNRINFSHPKSLLLHQNSFDEEINGSNKSE
QLSPTSKKDVKNLILYNSKNILDKVLSPTKDKNSINASQHANQSPMLSCQ
TTPPQDESLDKGSQPGGKENSSITTIDPQAASRILTRHKMMSEKAKLMME
KRKLNKTSDANDEERQQRLLEQARRLILETRVKSGGSIESPTRPKLERTI
SPIHNGAEEFYAEHAKKLELKEPGSPSHRLSDPKVLQSFNAIVERVSPKH
EKRGDKLSYIDSELEALEREQEAIDQKASNLEAKLRAVMGGNPKTEETEE
QLLSQWFTLVNKKNALLRRQMQLNILEQEKDLERKYTMLNQELRAAQSVE
DWRKTEVQREKERLLLEELMTIVDKRDQLVQHLHNQEIAIEDDQEIARKL
EHVDISAEKDKCVLQASFLDH
BO27705.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:10:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ehbp1-PG | 965 | CG15609-PG | 1..965 | 1..965 | 4942 | 100 | Plus |
| Ehbp1-PB | 987 | CG15609-PB | 1..987 | 1..965 | 4909 | 97.8 | Plus |
| Ehbp1-PI | 994 | CG15609-PI | 1..994 | 1..965 | 4891 | 97.1 | Plus |
| Ehbp1-PF | 1141 | CG15609-PF | 1..835 | 1..843 | 4108 | 94 | Plus |
| Ehbp1-PF | 1141 | CG15609-PF | 991..1141 | 816..965 | 608 | 83.4 | Plus |
| MICAL-like-PA | 1010 | CG11259-PA | 8..448 | 434..881 | 278 | 25.6 | Plus |
