BO27707.complete Sequence
541 bp assembled on 2010-08-18
GenBank Submission: KX798676
> BO27707.complete
GAAGTTATCAGTCGACATGTTGCGTCTGATTTGCGTGTTCCTGCTCAGCT
GCGTTGGCTTCCAGGCAGCCTTGGCTTGCAATGGCTACAAAGCCAAGCTG
GTCAAGTTGGAGAACTGTGCCGGCGAGGATGCCATTATGACGGTGGGCAG
TGACTTCAGCCTGAAGCTAAACAAGAAGTGTGAACTGGTACCCTCGGGCT
GCATCATGAACAAGCCGTTCAGTACCGCGGTGGCTAAGTTCAAGGTCCAG
AAGGATGGCATCGTAATGAAGGAGGGCAAGATCGATCTATGCGCCGCCAT
TGATCAGGCCTCCTCCGAAGGTAAGGACATGCTAAAGCTTTTCGGAGCAC
CTTCCTCCTGTCCGGTGGGCGAGGAGAAGGTGTGCGCCAACGATCACTCC
GTGGATCTGAGCAAGTACAAGGCCATGTTGGGCATGGCTCGTGGTCACCT
CATCATCGATTCTGAGGTCAAGCATGACACGGGCAAGTCCTGCATTCATG
CCGAAATCGAGATCACCAAGAACGCAAGCTTTCTAGACCAT
BO27707.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14277-RB | 510 | CG14277-PB | 1..507 | 17..523 | 2535 | 100 | Plus |
| CG14277-RA | 510 | CG14277-PA | 1..507 | 17..523 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14277-RB | 825 | CG14277-RB | 182..688 | 17..523 | 2535 | 100 | Plus |
| CG14277-RA | 679 | CG14277-RA | 36..542 | 17..523 | 2535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8242783..8243185 | 80..482 | 2015 | 100 | Plus |
| 2L | 23513712 | 2L | 8242667..8242729 | 17..79 | 315 | 100 | Plus |
| 2L | 23513712 | 2L | 8243247..8243289 | 481..523 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:37:12 has no hits.
BO27707.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:53 Download gff for
BO27707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14277-RA | 6..507 | 22..525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:13 Download gff for
BO27707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14277-RA | 41..542 | 22..525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:07 Download gff for
BO27707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14277-RA | 41..542 | 22..525 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:07 Download gff for
BO27707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8242672..8242729 | 22..79 | 100 | -> | Plus |
| 2L | 8242783..8243184 | 80..481 | 100 | -> | Plus |
| 2L | 8243248..8243289 | 482..525 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:13 Download gff for
BO27707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8242672..8242729 | 22..79 | 100 | -> | Plus |
| arm_2L | 8242783..8243184 | 80..481 | 100 | -> | Plus |
| arm_2L | 8243248..8243289 | 482..525 | 95 | | Plus |
BO27707.pep Sequence
Translation from 16 to 541
> BO27707.pep
MLRLICVFLLSCVGFQAALACNGYKAKLVKLENCAGEDAIMTVGSDFSLK
LNKKCELVPSGCIMNKPFSTAVAKFKVQKDGIVMKEGKIDLCAAIDQASS
EGKDMLKLFGAPSSCPVGEEKVCANDHSVDLSKYKAMLGMARGHLIIDSE
VKHDTGKSCIHAEIEITKNASFLDH
BO27707.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:10:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14277-PB | 169 | CG14277-PB | 1..169 | 1..169 | 876 | 100 | Plus |
| CG14277-PA | 169 | CG14277-PA | 1..169 | 1..169 | 876 | 100 | Plus |
