BO27713.complete Sequence
511 bp assembled on 2010-08-18
GenBank Submission: KX799674
> BO27713.complete
GAAGTTATCAGTCGACATGGCTCAAGAAAATCAAGCTGTCGACAATGGAC
TGCCCTGCAACGCTTACCTGGACACAAGCCTGCGAGAGGACGAAAACATG
CAACACATCCTGAAAACCTTTTACAGCAGCATCGAACTCCTGGAAGCCGA
CACGGAGAAGGCACTGGCGCTACAGGCAGAACGCACATTGAACACAAATG
AACAAATAAAATTGGATAGCTACCTTGTGTACTTGAACAGCACACTGTTT
TTCATATACCTGAAACTGCAGGGTGAAGATGCCTCAAATCATGCTGTGAT
GCACGATTTGCGTCGTACAAGGGACCTACTTGCCCGCGATAAGAAAATAA
ACGATGCTCTAGCGGCGCCAAGACTGGATATGCCCGCTGCCAAGCGATTT
ATCGCAGCTGGAACCCACACACGATTTGTGGACATGAACGGAGTTATGGT
CTCCGAAAAACAATATAATAAAAGCAAGCAAGAAACTCCCAAAGCAAGCT
TTCTAGACCAT
BO27713.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp47-RB | 480 | CG8928-PB | 1..477 | 17..493 | 2385 | 100 | Plus |
| Rrp47-RA | 480 | CG8928-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp47-RB | 1285 | CG8928-RB | 158..636 | 15..493 | 2395 | 100 | Plus |
| Rrp47-RA | 842 | CG8928-RA | 77..555 | 15..493 | 2395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15945054..15945328 | 15..289 | 1375 | 100 | Plus |
| X | 23542271 | X | 15945397..15945600 | 290..493 | 1020 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Galileo | 2304 | Dbuz\Galileo GALILEO 2304bp | 1746..1786 | 167..207 | 106 | 73.2 | Plus |
BO27713.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:54 Download gff for
BO27713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8928-RA | 46..522 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:15 Download gff for
BO27713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp47-RA | 79..555 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:08 Download gff for
BO27713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp47-RA | 79..555 | 17..495 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:08 Download gff for
BO27713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15945056..15945328 | 17..289 | 100 | -> | Plus |
| X | 15945397..15945600 | 290..495 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:15 Download gff for
BO27713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15839430..15839633 | 290..495 | 99 | | Plus |
| arm_X | 15839089..15839361 | 17..289 | 100 | -> | Plus |
BO27713.pep Sequence
Translation from 16 to 511
> BO27713.pep
MAQENQAVDNGLPCNAYLDTSLREDENMQHILKTFYSSIELLEADTEKAL
ALQAERTLNTNEQIKLDSYLVYLNSTLFFIYLKLQGEDASNHAVMHDLRR
TRDLLARDKKINDALAAPRLDMPAAKRFIAAGTHTRFVDMNGVMVSEKQY
NKSKQETPKASFLDH
BO27713.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:10:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp47-PB | 159 | CG8928-PB | 1..159 | 1..159 | 806 | 100 | Plus |
| Rrp47-PA | 159 | CG8928-PA | 1..159 | 1..159 | 806 | 100 | Plus |
