BO27722.complete Sequence
658 bp assembled on 2010-08-18
GenBank Submission: KX795541
> BO27722.complete
GAAGTTATCAGTCGACATGGGTGCTTGTCGCCCTAGAAAATGTAGTGCAA
ATAACCGAACTATGGCAATTCGTCGCCGTAGAGCTCTAGTTAACTTGCTA
TTTTTGCGCCGTCATTTGATTGGACAGGCACTTGGAATTACGAATCGGGA
AACTCCAGACCTTAGGGTAAAATCGCGGCGACGCAATCGTAGAAGGAGAA
TGCAATTCAGAGTCCGTACACCAAGTGATAATGCAATGCGCTCAGTAAGG
CATCATGGACAGAATCCAATCAGCCCAGGATCACGGCTACAACGAAATAA
TCCACTTTGGGGACACGCCGACATTATAACCACAGATAGAGCGTTGGAAG
CTTTAAATGGACTTACTACAGGGAACAGGGAACCAAATGCATTGTCAGTA
ATGGTGCGATATACCAATGGGCGGTATTATTTAAGCTTAGAGCCAAGTGG
AAATCAGCAAAATGAGAACAATATCGTTCAAAATCCCAGTCGGAATGGTC
AGAACCAACAGGTCGAAGACGGCAATGATCGGAATCTTCAACCGGCAGCT
CAGGCAGCTGATGATGATAACAATATGACAAATTCAAATCCGGAGGTTCC
AGATGTCGGAGGCAAATCAGAAGGATCAAGGGAATGCCCAGCAAGCTTTC
TAGACCAT
BO27722.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31709-RB | 627 | CG31709-PB | 1..624 | 17..640 | 3120 | 100 | Plus |
CG31709-RA | 627 | CG31709-PA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31709-RB | 1395 | CG31709-RB | 75..698 | 17..640 | 3120 | 100 | Plus |
CG31709-RA | 960 | CG31709-RA | 75..698 | 17..640 | 3120 | 100 | Plus |
gcm-RB | 2173 | CG12245-RB | 2107..2160 | 17..70 | 270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9579093..9579447 | 425..71 | 1775 | 100 | Minus |
2L | 23513712 | 2L | 9578817..9579031 | 640..426 | 1075 | 100 | Minus |
2L | 23513712 | 2L | 9579511..9579564 | 70..17 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:37:31 has no hits.
BO27722.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:57 Download gff for
BO27722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31709-RA | 75..698 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:23 Download gff for
BO27722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31709-RA | 75..698 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:15 Download gff for
BO27722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31709-RA | 75..698 | 17..642 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:15 Download gff for
BO27722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9578814..9579031 | 426..642 | 99 | <- | Minus |
2L | 9579093..9579447 | 71..425 | 100 | <- | Minus |
2L | 9579511..9579564 | 17..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:23 Download gff for
BO27722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9578814..9579031 | 426..642 | 99 | <- | Minus |
arm_2L | 9579093..9579447 | 71..425 | 100 | <- | Minus |
arm_2L | 9579511..9579564 | 17..70 | 100 | | Minus |
BO27722.pep Sequence
Translation from 16 to 658
> BO27722.pep
MGACRPRKCSANNRTMAIRRRRALVNLLFLRRHLIGQALGITNRETPDLR
VKSRRRNRRRRMQFRVRTPSDNAMRSVRHHGQNPISPGSRLQRNNPLWGH
ADIITTDRALEALNGLTTGNREPNALSVMVRYTNGRYYLSLEPSGNQQNE
NNIVQNPSRNGQNQQVEDGNDRNLQPAAQAADDDNNMTNSNPEVPDVGGK
SEGSRECPASFLDH
BO27722.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:11:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31709-PB | 208 | CG31709-PB | 1..208 | 1..208 | 1095 | 100 | Plus |
CG31709-PA | 208 | CG31709-PA | 1..208 | 1..208 | 1095 | 100 | Plus |