BO27723.complete Sequence
484 bp assembled on 2010-08-18
GenBank Submission: KX799873
> BO27723.complete
GAAGTTATCAGTCGACATGGTCTTCCTGAACCTTCCCTTGCTGGTACGGT
CCCGTGGTCCGGACGAATTCTGGCGGAAGAGACGCATCTTCAAGCTGGCA
GCGCATTATAGAAGCCGCACTCGCAATGTCTACTCCTTCGCCATCCGGAG
TGTCCATAGGGCACTGGCCTATGCCACCAAGGGGCGAAAGCTAAAGAAAC
TGGACATGGCGCAACTGTGGAGCACACGCGTGGAGGCGGGTTGTCAGCAG
TATGGAGTAGGTCTGGAAACCTTCAAAGAGGGCCTCGCGCGCTCCGATAT
TCTGCTCAACAAAAAAGTCCTATCCGACCTCGCCATTTGGGAGCCGCGAT
CTTTTGAAGCTCTAGTAAAGATCTCTCGAGAGCGGGCAGCTGTGGAGGGA
ATGCCAGACATCAAACGGAGATCGGCATTTAACCAGGTCTATGGACTGAG
CAACCTGAAGTTGGATGCAAGCTTTCTAGACCAT
BO27723.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL20-RA | 453 | CG11258-PA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL20-RA | 602 | CG11258-RA | 105..555 | 16..466 | 2255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13017404..13017613 | 312..103 | 1050 | 100 | Minus |
| 3L | 28110227 | 3L | 13017196..13017349 | 466..313 | 770 | 100 | Minus |
| 3L | 28110227 | 3L | 13017676..13017763 | 103..16 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:36:28 has no hits.
BO27723.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:42 Download gff for
BO27723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL20-RA | 72..521 | 17..468 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:55 Download gff for
BO27723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL20-RA | 106..555 | 17..468 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:51 Download gff for
BO27723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL20-RA | 106..555 | 17..468 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:51 Download gff for
BO27723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13017194..13017349 | 313..468 | 98 | <- | Minus |
| 3L | 13017404..13017612 | 104..312 | 100 | <- | Minus |
| 3L | 13017676..13017762 | 17..103 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:55 Download gff for
BO27723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13010294..13010449 | 313..468 | 98 | <- | Minus |
| arm_3L | 13010504..13010712 | 104..312 | 100 | <- | Minus |
| arm_3L | 13010776..13010862 | 17..103 | 100 | | Minus |
BO27723.pep Sequence
Translation from 16 to 484
> BO27723.pep
MVFLNLPLLVRSRGPDEFWRKRRIFKLAAHYRSRTRNVYSFAIRSVHRAL
AYATKGRKLKKLDMAQLWSTRVEAGCQQYGVGLETFKEGLARSDILLNKK
VLSDLAIWEPRSFEALVKISRERAAVEGMPDIKRRSAFNQVYGLSNLKLD
ASFLDH
BO27723.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:09:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL20-PA | 150 | CG11258-PA | 1..150 | 1..150 | 762 | 100 | Plus |
