BO27727.complete Sequence
622 bp assembled on 2010-08-18
GenBank Submission: KX799018
> BO27727.complete
GAAGTTATCAGTCGACATGTCGACAAACCCAAGTCCGCAGCGGCAACAGT
CCGAGGACGTTCAGATCTCGATGGCCAGTTCCGGAGGAGGAGCCGGCAAT
GGCGTTCCGGATAGACTGCCTCCGATCAACGTAAAGGACCAACGCTTCCC
CTACTGCATCGTTTGGACTCCCATTCCGGTTCTCACCTGGCTGATGCCCA
TGATCGGACATATGGGCATTTGCACTTCGTCCGGTGTGATTCGTGACTTC
GCCGGCCCCTACTTCGTATCAGAGGACAACATGGCCTTTGGAAGACCCAC
CCGGTACATAAGGTTGCACCCCAAGCACATGGTGGGCGGCAGTTACGCCT
GGGACGAGGCGGTCTCCAAAGCATCTGTGCTCTACGGCACCCGCATCCAC
AATATCTTCTGTGACAACTGCCACTCGCATGTGGCAACGGCACTCATCTA
CATGCGCTACTACGACAGCACCGCATGGAACATGATTATCCTCAGCATGT
GGCTCTTTGTCTGCGGCCGCTACGTCGGAATAGGGGGTTTTATTAAGACC
TGGCTGCCGTTTGCCATTCTCCTGTCCATCTTCACCATTCTGGGCATCTA
TTTTGCAAGCTTTCTAGACCAT
BO27727.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-RB | 591 | CG8372-PB | 1..588 | 17..604 | 2940 | 100 | Plus |
| CG8372-RA | 537 | CG8372-PA | 1..534 | 71..604 | 2670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-RB | 864 | CG8372-RB | 194..781 | 17..604 | 2940 | 100 | Plus |
| CG8372-RA | 790 | CG8372-RA | 137..707 | 34..604 | 2855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8212122..8212709 | 604..17 | 2940 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:36:33 has no hits.
BO27727.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:44 Download gff for
BO27727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 173..760 | 17..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:58 Download gff for
BO27727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 194..781 | 17..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:52 Download gff for
BO27727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 194..781 | 17..606 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:52 Download gff for
BO27727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8212120..8212709 | 17..606 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:58 Download gff for
BO27727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8212120..8212709 | 17..606 | 99 | | Minus |
BO27727.pep Sequence
Translation from 16 to 622
> BO27727.pep
MSTNPSPQRQQSEDVQISMASSGGGAGNGVPDRLPPINVKDQRFPYCIVW
TPIPVLTWLMPMIGHMGICTSSGVIRDFAGPYFVSEDNMAFGRPTRYIRL
HPKHMVGGSYAWDEAVSKASVLYGTRIHNIFCDNCHSHVATALIYMRYYD
STAWNMIILSMWLFVCGRYVGIGGFIKTWLPFAILLSIFTILGIYFASFL
DH
BO27727.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:09:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-PB | 196 | CG8372-PB | 1..196 | 1..196 | 1072 | 100 | Plus |
| CG8372-PA | 178 | CG8372-PA | 1..178 | 19..196 | 982 | 100 | Plus |
