BO27735.complete Sequence
583 bp assembled on 2010-08-18
GenBank Submission: KX797437
> BO27735.complete
GAAGTTATCAGTCGACATGGCTGAAAGTCAGGAATCCCCGCAGGATTCGT
CGGTCTCGTCACGCATCACGCTCTTCAACCAACAAGCTGAGCAGCATAAA
AACTGGATGATGATAAACCCCTTTGCCCATTACAACGTCAACGAGATGCC
CAAGAGGACCTTTCCAGAGGAGGAATACGGCAGAGCTCCGACGGGCAGTC
TTTCCGAGCAGAGATCCTTGCAGGCCAATGTACGTGCTCTGGAGGAGATT
CTCCAACTGTGCGATTTGATACAGAAATCCGGTCGTGATGATCCCATTGA
TGGCCGAAAGGTACTAGCTTTCGGGCAACTATTTGAAACTTACAACAATA
TCTCCGACAAGTTGCTTGCCACTCTGTTGGGTGCCCGAAAGTATGGGTTC
GTAGACTTTAGCGGAGAAACCCTTTTTCAAGGTCGTGATGATACAGAACC
CGTCCGCCTGCTTCGCCCCTTCGAGGAGCTCCAAGCCGAAATCATTTCCA
AGGTCGCCGATCTGCGCTGCGATTTCACTGAAAAACCGGAGGAACCGACT
CTGCTTCGCGAGGATGCAAGCTTTCTAGACCAT
BO27735.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2113-RA | 552 | CG2113-PA | 1..549 | 17..565 | 2745 | 100 | Plus |
| CG2113-RB | 540 | CG2113-PB | 13..537 | 41..565 | 2625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2113-RA | 926 | CG2113-RA | 79..627 | 17..565 | 2745 | 100 | Plus |
| CG2113-RB | 914 | CG2113-RB | 91..615 | 41..565 | 2625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2995321..2995856 | 30..565 | 2680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:36:44 has no hits.
BO27735.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:47 Download gff for
BO27735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2113-RA | 71..619 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:03 Download gff for
BO27735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2113-RA | 79..627 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:56 Download gff for
BO27735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2113-RA | 79..627 | 17..567 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:56 Download gff for
BO27735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2995323..2995856 | 32..567 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:03 Download gff for
BO27735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2995323..2995856 | 32..567 | 99 | | Plus |
BO27735.pep Sequence
Translation from 16 to 583
> BO27735.pep
MAESQESPQDSSVSSRITLFNQQAEQHKNWMMINPFAHYNVNEMPKRTFP
EEEYGRAPTGSLSEQRSLQANVRALEEILQLCDLIQKSGRDDPIDGRKVL
AFGQLFETYNNISDKLLATLLGARKYGFVDFSGETLFQGRDDTEPVRLLR
PFEELQAEIISKVADLRCDFTEKPEEPTLLREDASFLDH
BO27735.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:09:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2113-PA | 183 | CG2113-PA | 1..183 | 1..183 | 943 | 100 | Plus |
| CG2113-PB | 179 | CG2113-PB | 1..179 | 1..183 | 907 | 97.8 | Plus |
| CG3630-PD | 371 | CG3630-PD | 16..192 | 10..185 | 370 | 41.3 | Plus |
| CG3630-PC | 371 | CG3630-PC | 16..192 | 10..185 | 370 | 41.3 | Plus |
| CG3630-PA | 371 | CG3630-PA | 16..192 | 10..185 | 370 | 41.3 | Plus |
