BO27743.complete Sequence
421 bp assembled on 2010-08-18
GenBank Submission: KX797090
> BO27743.complete
GAAGTTATCAGTCGACATGTTTGGCCCGCTGCAGATTATCGTTTTTGCCA
CTATCTTGGTGGCCGTGGCCATGGCCATGCAGCCACTGGAGGACAATGAG
CGAACCCATCATCTGAACCACAAGCGCCAGTTGTCGCAACAGCACCACCA
CCACCACCAAAAGCTCCAGGAGGTGAGGCATTCGGGCCATGATAGTCTGA
AACATGGTGGTTCCCACGTTAAGGAGCATCAAGCGCATCACTCTGAGCGA
AAGGCCAGGCAGAGCCACAAGGAGCCGGGCCACAAGAAGAGTCACCACCA
GAAGGAGCACCGCCAGCAGCAGGACAACCACACCCGCAAATCCCGATCGC
ATTCCAAGGGCAGCAAGCAGCATCACAAGCGGCACACGGGATCGCGTCGC
CACGCAAGCTTTCTAGACCAT
BO27743.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RB | 390 | CG34232-PB | 1..387 | 17..403 | 1935 | 100 | Plus |
CG34232-RC | 384 | CG34232-PC | 12..381 | 34..403 | 1850 | 100 | Plus |
CG34232-RA | 384 | CG34232-PA | 12..381 | 34..403 | 1850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RB | 831 | CG34232-RB | 229..615 | 17..403 | 1935 | 100 | Plus |
CG34232-RC | 775 | CG34232-RC | 190..559 | 34..403 | 1850 | 100 | Plus |
CG34232-RA | 702 | CG34232-RA | 117..486 | 34..403 | 1850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12165125..12165511 | 403..17 | 1935 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:37:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 696..737 | 301..342 | 111 | 73.8 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 8578..8619 | 301..342 | 111 | 73.8 | Plus |
BO27743.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:00 Download gff for
BO27743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 198..578 | 23..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:27 Download gff for
BO27743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 215..595 | 23..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:18 Download gff for
BO27743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 235..615 | 23..405 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:18 Download gff for
BO27743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12165123..12165505 | 23..405 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:27 Download gff for
BO27743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8052628..8053010 | 23..405 | 99 | | Minus |
BO27743.pep Sequence
Translation from 16 to 421
> BO27743.pep
MFGPLQIIVFATILVAVAMAMQPLEDNERTHHLNHKRQLSQQHHHHHQKL
QEVRHSGHDSLKHGGSHVKEHQAHHSERKARQSHKEPGHKKSHHQKEHRQ
QQDNHTRKSRSHSKGSKQHHKRHTGSRRHASFLDH
BO27743.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:11:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-PB | 129 | CG34232-PB | 1..129 | 1..129 | 711 | 100 | Plus |
CG34232-PC | 127 | CG34232-PC | 5..127 | 7..129 | 678 | 100 | Plus |
CG34232-PA | 127 | CG34232-PA | 5..127 | 7..129 | 678 | 100 | Plus |