BO27747.complete Sequence
1612 bp assembled on 2010-10-15
GenBank Submission: KX796335
> BO27747.complete
GAAGTTATCAGTCGACATGAGCAGCGGCACCGCCGGCTGCAAGCGCGCGC
ACAGCATCGAGGTTGAGCAGCCGCTGACGTCGGAGCGCCTGGAGCACAGC
CTGCTGTTGGTCAAGGGACGCCTGGTGCCCAAGTGTTCCACGGCGCGTCA
ACTGAAGGCGATCCTCGATCTGCCCGAGCACCTGTCCCAGGAGCAGCTCA
CCCAGCTGTCGGCCGGCGGCGAGTTTAAGCTCCTATTCGACTTGGAACAA
GCGAATCGCGAGGAGGAGGAGGAGGAGAGCGCCTGCCTCCTGGAGTTGCG
ATCCTGCACGGCCACCCGAACGATTAGCTTCAGTTACCGGCCCCGCCGCA
GCTCCTACCGGGTGCAGCCGCTCTACCTGCTCTGTCAGGACGAGGAGAAG
ACGCTGGCGCAGCAGCACGAGGTGCACTCCCTCATCGATCTTAATTTGCG
GCTGGTGCAGTCCATCTACGCGCACAAACTGCACGCGGCGGGCTTTCCCA
ACCGCACCTTCACGCTCAACGGCAAGTGCTGCGCCTTCCGCAGCCAGTTG
ACCCGGAAACAGGCGCTGGCGAAGAGCGAGGACGAGCTGTGGCAGCATTT
CGCCGGCGAGATTATCGCCTGTCCGCAGTGGGGCCACCAGTTGCTCCTCA
AGTTCGTCGCCTTTGTGGGCTGCACGCGCTACGACGGCGACGCAGTGGTG
GCCAGCGGTGACTCCTCGTACGCCAACATCCGGCGGCATCTCAAGGGACA
CGCAGCACTCGGTGGCGGCGGCTTGGCGCTCTTTGGTAGTGCCCACTTCT
ACGCGTGGCCCACGAGCTTCGCGGAGATCGGCGACTGTGTGCGCAGCGCC
CAGCGGGTGGACATCGCCCGCCTGCCGGACGAGAGCAACTATCGGCGGAC
GTACGGCGGCGTCTATGCCAGCACCTTGGGCGCCGTGTGCCACGAACTGG
GCCACTGCTTCGATCTGGGCCACACCAGCGAGGGTGTGATGGGCCAGGGC
TTCGACTACTTGAATCGCGTGTTGACCGTGGACCAGCCCACGGAGCATTT
GCCGCAGCGAATTGTGGACGCCCGCAGGGGCTCACTTGCCAATACTAATT
CATCCGAGGGCGGATCATCCTCATCCAGCTCCACCTCCTCCTCCTCCTCG
TCCGCCGGCAGTGGCGCCGCAACGGGCAACCGCGCCCGCCTCACCAAACT
GAAATTGCAGCCAAGCAGCCAACTGCTGGACAACTACCACAACCAGCGAC
GCCACGATAGCTTCTATTTTGCACGCAACTGTGCCGTAATCCTGGCCCAT
CATCGCTGGCTGAATTTGGAGCTGGAGCAGACGGCTGCCGTCGACTTTGA
GGCGGCCAGCATACAATTGAACCGCGACACGCGTGAGATTCGCTCCAGCA
GGCCCATCCGACTGATCGAGCTGCGCTGCAACCAGAACAGCCTGGTGGCC
CACTACGAGGAGTTCGAGGAGCCGTATGTGCACCGCTTCCAGCTGCCCGC
TTCGCTGTGGCATCTCCTCGCGGAGCAGTGCACCCACTACGTTTTCGTGC
TGACCACCAGTGGCGACACCAAGCGGCTATCCTGCGATTCCTCCGCAAGC
TTTCTAGACCAT
BO27747.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6294-RB | 1581 | CG6294-PB | 1..1578 | 17..1594 | 7890 | 100 | Plus |
| CG6294-RA | 1581 | CG6294-PA | 1..1578 | 17..1594 | 7890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:04:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6299-RB | 2551 | CG6299-RB | 107..1684 | 17..1594 | 7890 | 100 | Plus |
| CG6294-RB | 2306 | CG6294-RB | 107..1684 | 17..1594 | 7890 | 100 | Plus |
| CG6294-RA | 2551 | CG6294-RA | 107..1684 | 17..1594 | 7890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:04:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15462828..15464405 | 17..1594 | 7890 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:04:19 has no hits.
BO27747.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-15 09:23:06 Download gff for
BO27747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6294-RA | 114..1691 | 17..1596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:28:35 Download gff for
BO27747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6294-RA | 107..1684 | 17..1596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:54 Download gff for
BO27747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6294-RA | 107..1684 | 17..1596 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:54 Download gff for
BO27747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15462828..15464405 | 17..1596 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:28:35 Download gff for
BO27747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15356861..15358438 | 17..1596 | 99 | | Plus |
BO27747.pep Sequence
Translation from 16 to 1612
> BO27747.pep
MSSGTAGCKRAHSIEVEQPLTSERLEHSLLLVKGRLVPKCSTARQLKAIL
DLPEHLSQEQLTQLSAGGEFKLLFDLEQANREEEEEESACLLELRSCTAT
RTISFSYRPRRSSYRVQPLYLLCQDEEKTLAQQHEVHSLIDLNLRLVQSI
YAHKLHAAGFPNRTFTLNGKCCAFRSQLTRKQALAKSEDELWQHFAGEII
ACPQWGHQLLLKFVAFVGCTRYDGDAVVASGDSSYANIRRHLKGHAALGG
GGLALFGSAHFYAWPTSFAEIGDCVRSAQRVDIARLPDESNYRRTYGGVY
ASTLGAVCHELGHCFDLGHTSEGVMGQGFDYLNRVLTVDQPTEHLPQRIV
DARRGSLANTNSSEGGSSSSSSTSSSSSSAGSGAATGNRARLTKLKLQPS
SQLLDNYHNQRRHDSFYFARNCAVILAHHRWLNLELEQTAAVDFEAASIQ
LNRDTREIRSSRPIRLIELRCNQNSLVAHYEEFEEPYVHRFQLPASLWHL
LAEQCTHYVFVLTTSGDTKRLSCDSSASFLDH
BO27747.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:12:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6294-PB | 526 | CG6294-PB | 1..526 | 1..526 | 2743 | 100 | Plus |
| CG6294-PA | 526 | CG6294-PA | 1..526 | 1..526 | 2743 | 100 | Plus |
