BO27760.complete Sequence
532 bp assembled on 2010-08-18
GenBank Submission: KX796761
> BO27760.complete
GAAGTTATCAGTCGACATGCCAGATGCCGAGCAACTACCGGACGGCTGGG
AGAAGCGCACTAGCCGCTCCACAGGAATGAGCTATTATCTCAATATGTAC
ACAAAGGAGTCGCAGTGGGATCAGCCCACAGAGCCGGCGAAGAAGGCGGG
CGGAGGATCCGCCGGCGGCGGAGATGCACCGGACGAGGTGCATTGCCTGC
ATCTGCTGGTTAAGCACAAGGGCAGTCGGCGTCCCAGCTCGTGGCGCGAG
GCGAACATCACGCGCACCAAGGAGGAGGCCCAGCTGCTCCTCGAGGTCTA
TCGCAACAAAATCGTCCAGCAGGAGGCCACATTCGACGAGCTGGCCCGCT
CCTACTCCGACTGCAGCTCCGCCAAGAGGGGCGGCGACCTGGGAAAGTTC
GGCAGAGGTCAGATGCAGGCGGCTTTCGAGGACGCTGCCTTCAAATTGAA
CGTCAACCAGCTGTCGGGCATCGTCGACAGCGACTCCGGCCTGCACATCA
TCCTGCGCAAGGCAGCAAGCTTTCTAGACCAT
BO27760.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dod-RA | 501 | CG17051-PA | 1..498 | 17..514 | 2490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dod-RA | 1021 | CG17051-RA | 93..591 | 16..514 | 2495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21345617..21345954 | 72..409 | 1690 | 100 | Plus |
| X | 23542271 | X | 21346320..21346428 | 406..514 | 545 | 100 | Plus |
| X | 23542271 | X | 21345450..21345509 | 16..75 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:37:47 has no hits.
BO27760.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:01 Download gff for
BO27760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 72..569 | 17..516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:29 Download gff for
BO27760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 94..591 | 17..516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:20 Download gff for
BO27760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 94..591 | 17..516 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:20 Download gff for
BO27760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21345620..21345952 | 75..407 | 100 | -> | Plus |
| X | 21346322..21346428 | 408..516 | 98 | | Plus |
| X | 21345451..21345508 | 17..74 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:29 Download gff for
BO27760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21217349..21217455 | 408..516 | 98 | | Plus |
| arm_X | 21216647..21216979 | 75..407 | 100 | -> | Plus |
| arm_X | 21216478..21216535 | 17..74 | 100 | -> | Plus |
BO27760.pep Sequence
Translation from 16 to 532
> BO27760.pep
MPDAEQLPDGWEKRTSRSTGMSYYLNMYTKESQWDQPTEPAKKAGGGSAG
GGDAPDEVHCLHLLVKHKGSRRPSSWREANITRTKEEAQLLLEVYRNKIV
QQEATFDELARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLS
GIVDSDSGLHIILRKAASFLDH
BO27760.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:11:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dod-PA | 166 | CG17051-PA | 1..166 | 1..166 | 871 | 100 | Plus |
| CG32845-PA | 386 | CG32845-PA | 72..243 | 6..172 | 250 | 36 | Plus |
