BO27761.complete Sequence
883 bp assembled on 2010-09-23
GenBank Submission: KX798010
> BO27761.complete
GAAGTTATCAGTCGACATGCATGTTGAAAAGAAATCAGAGCTTCGTAGCC
TACTAAAATCCGGGGACAAGCGTTGCAAACTCGTTGAGCCCAGGAACACC
AAAAGCTGCGTCTGGAGGTTTTTCAATCTCGTCCAGTGCGACGACCACAT
AGAGCCGTACGCCTGCTGCAAAACCTGTGGCGATCTGTTATCCTACAGCG
GCAAAACTGGAACCGGATCCCTGCTACGGCACCGATGTCTCCACTCCAGC
AGCAGTAACGACAAAACCGTGCGGATTACCAAGGCCAAGACGCTGAGGGA
GCCGCTGCGTGTGGCCAAGCCGAAGATCGAGTCGAACGTCGCCAATTATC
TGGGCGAGGCGGGCGCCCTGCCGCAAAAGTGGGAGGAGTACGAGCAGAAC
GATGAGATTAGCGAGGACATTAAGGACATCATATACAGCGAGGATCCACT
GTGCTATAGTCCTATACACGTGATGGATGATGAGGGCCTGGATCAGCCTG
AGAAGCAAGTGACCGTGCTAACCCATTCGACTTCACCAGCCGGTGGAAGT
AGCAGGCCCATCGGTGTTGGTTCGGGCGTACAGGCTACTGTGGTGGCCTC
CACGTCCTCCAGCAGCAGCTCGGCCAAGCAGCTGAAGAACAACCTGGAGA
CGTCCATCGAACGGCTGACCGCTGTCAGCGAACAGCTCAGCTACATCATA
CAACAGAATCACGAGGAGCTCACCAAGGACGACGACTACTATTTTGCACT
TAGCTTGGTGCCCGCAATGCGCCACCTTTCGCTCAGTCGGAAGATGTACG
TGCGGTCCAAGATCCAGGATATACTGTTCAAGGAAAGTGAGGACTCAACG
CTTGCCAAGGATGAGGCAAGCTTTCTAGACCAT
BO27761.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:05:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BEAF-32-RA | 852 | CG10159-PA | 1..849 | 17..865 | 4245 | 100 | Plus |
| BEAF-32-RC | 849 | CG10159-PC | 241..846 | 260..865 | 3030 | 100 | Plus |
| BEAF-32-RB | 849 | CG10159-PB | 241..846 | 260..865 | 3030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BEAF-32-RA | 1192 | CG10159-RA | 118..966 | 17..865 | 4245 | 100 | Plus |
| BEAF-32-RC | 1558 | CG10159-RC | 727..1332 | 260..865 | 3030 | 100 | Plus |
| BEAF-32-RB | 1173 | CG10159-RB | 342..947 | 260..865 | 3030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:05:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14771799..14772404 | 260..865 | 3030 | 100 | Plus |
| 2R | 25286936 | 2R | 14770586..14770829 | 17..260 | 1220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:05:20 has no hits.
BO27761.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-23 15:34:56 Download gff for
BO27761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RA | 117..965 | 17..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:24 Download gff for
BO27761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RA | 118..966 | 17..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:10:36 Download gff for
BO27761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RA | 118..966 | 17..867 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:10:36 Download gff for
BO27761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14770586..14770829 | 17..260 | 100 | -> | Plus |
| 2R | 14771800..14772404 | 261..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:24 Download gff for
BO27761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10658091..10658334 | 17..260 | 100 | -> | Plus |
| arm_2R | 10659305..10659909 | 261..867 | 99 | | Plus |
BO27761.pep Sequence
Translation from 16 to 883
> BO27761.pep
MHVEKKSELRSLLKSGDKRCKLVEPRNTKSCVWRFFNLVQCDDHIEPYAC
CKTCGDLLSYSGKTGTGSLLRHRCLHSSSSNDKTVRITKAKTLREPLRVA
KPKIESNVANYLGEAGALPQKWEEYEQNDEISEDIKDIIYSEDPLCYSPI
HVMDDEGLDQPEKQVTVLTHSTSPAGGSSRPIGVGSGVQATVVASTSSSS
SSAKQLKNNLETSIERLTAVSEQLSYIIQQNHEELTKDDDYYFALSLVPA
MRHLSLSRKMYVRSKIQDILFKESEDSTLAKDEASFLDH
BO27761.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:33:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BEAF-32-PA | 283 | CG10159-PA | 1..283 | 1..283 | 1460 | 100 | Plus |
| BEAF-32-PC | 282 | CG10159-PC | 2..282 | 25..283 | 1034 | 76.2 | Plus |
| BEAF-32-PB | 282 | CG10159-PB | 2..282 | 25..283 | 1034 | 76.2 | Plus |
