BO27765.complete Sequence
775 bp assembled on 2010-08-18
GenBank Submission: KX798343
> BO27765.complete
GAAGTTATCAGTCGACATGACCAAAGTTGAGCTATACAAGTCGCGCGTCT
TTGTGACAATCATACACCTGTGTGCACTCGGCCAATTCGCCTATGGACTC
TACTACAGCTCCTTCGAGATCCAAAGGAGCTACAAACTGAAGACGAGCCT
CAATCGCCGCCTGGTTCCCGAATCGCTGCCCCAGAAAATCAAATTGCTGT
CCTACTGGTCGCTGATAATTCAGGCACTGTACTATATTGTATCGCTGGTC
AACGATTTCGTGGGCACTAATGAGCTGACACCCAAGAAACCTCCGGCGGT
TCGCAGGTTCAAGGACTGGCTGATGGCTACATTGGCCTTTCCAGTGGCTA
TCAATGTGGGCGTGACCTTCTGGACACTGTACGCTATCGACAGGGAGCTA
GTCTTCCCCAAGGTTCTGGACCCCGTGTTCCCCAGCTGGCTCAACCACGT
CCTGCACACCAACATAGTGGTTTTCATCATCCTGGAGCTGTTCATCTCGT
ACAGGTCGTACCCAAAACGAAGCCAAGGACTCGCAGGACTGGCCATTTTC
ATGGGCGCCTACCTGGTTTGGATTCACGTGGTGAAGCACTACTCGGGTGT
GTGGGTGTATCCAGTGCTCGAGGTTCTCCAGCTTCCGCAACGCATCCTGT
TTTTTGCGGCCGTCGTTGGATTCACGCTGTCACTTTACCTGCTGGGCGAG
TTCCTCAACAATACCGTCTGGGCCAAGGAAGTGAAGTTGGCCAAGCGCAA
ATCCAACGCAAGCTTTCTAGACCAT
BO27765.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3625-RE | 744 | CG3625-PE | 1..741 | 17..757 | 3705 | 100 | Plus |
| CG3625-RC | 744 | CG3625-PC | 1..741 | 17..757 | 3705 | 100 | Plus |
| CG3625-RB | 747 | CG3625-PB | 201..744 | 214..757 | 2720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3625-RE | 1401 | CG3625-RE | 157..897 | 17..757 | 3705 | 100 | Plus |
| CG3625-RC | 1455 | CG3625-RC | 211..951 | 17..757 | 3705 | 100 | Plus |
| CG3625-RB | 1341 | CG3625-RB | 294..837 | 214..757 | 2720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 283889..284213 | 757..433 | 1625 | 100 | Minus |
| 2L | 23513712 | 2L | 284748..284969 | 435..214 | 1110 | 100 | Minus |
| 2L | 23513712 | 2L | 290809..291010 | 218..17 | 995 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:37:52 has no hits.
BO27765.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:02 Download gff for
BO27765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RC | 1..741 | 17..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:30 Download gff for
BO27765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RC | 211..951 | 17..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:23 Download gff for
BO27765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RC | 211..951 | 17..759 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:23 Download gff for
BO27765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 283887..284210 | 436..759 | 99 | <- | Minus |
| 2L | 284748..284968 | 215..435 | 100 | <- | Minus |
| 2L | 290813..291010 | 17..214 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:30 Download gff for
BO27765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 290813..291010 | 17..214 | 100 | | Minus |
| arm_2L | 283887..284210 | 436..759 | 99 | <- | Minus |
| arm_2L | 284748..284968 | 215..435 | 100 | <- | Minus |
BO27765.pep Sequence
Translation from 16 to 775
> BO27765.pep
MTKVELYKSRVFVTIIHLCALGQFAYGLYYSSFEIQRSYKLKTSLNRRLV
PESLPQKIKLLSYWSLIIQALYYIVSLVNDFVGTNELTPKKPPAVRRFKD
WLMATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTNI
VVFIILELFISYRSYPKRSQGLAGLAIFMGAYLVWIHVVKHYSGVWVYPV
LEVLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSNASF
LDH
BO27765.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3625-PE | 247 | CG3625-PE | 1..247 | 1..247 | 1278 | 100 | Plus |
| CG3625-PC | 247 | CG3625-PC | 1..247 | 1..247 | 1278 | 100 | Plus |
| CG3625-PB | 248 | CG3625-PB | 19..248 | 14..247 | 998 | 84.2 | Plus |
| CG3625-PA | 245 | CG3625-PA | 25..245 | 15..247 | 967 | 82.1 | Plus |
| CG11601-PC | 275 | CG11601-PC | 43..270 | 15..245 | 546 | 42.9 | Plus |
