Clone BO27767 Report

Search the DGRC for BO27767

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:277
Well:67
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO27767.pep: Imported from assembly
Sequenced Size:808

Clone Sequence Records

BO27767.complete Sequence

808 bp assembled on 2010-09-23

> BO27767.complete
GAAGTTATCAGTCGACATGGAACTGCGGAGCAAACATCGCATAATGGGTG
CTCCAGTGGGCACAGCGAACACAAAAGGCTGGAGTCCTAATCAATCCACT
CTGCCCGTGGAGCTCAGTAAATTTGAAACCCAATTGCTTTTGGATGAGAA
TATAGCAAAGTTAGTTGATAAATCCAAAGATCTAAAGGCTAAACCCACTG
CCGAGAAACTTGAGGAGTGCAAGGCGGATTTTGAATCCCGGTTACTGGGA
CAGGAGGAAGCATTGAAAACGGAGAAACTACGGGAAACTGAACGATACAT
GGATAAGATTCTGACGGGAAAACGCAAGAAGTTGCTCAAGCAGGGCAAAA
ATGAATTGGCTGCCGCTCTGACTGATAAGGATGTACTATTGGAGATGTCT
GTGAATTTCAAATTCGATCGCCAAAATGCCTTGCTGGAGGTGCATTGTGA
ACATCCCACGGATCACTCTGCGCAAATAGTTACCGGTCCCATTGTGCACA
CCAATTCCCTGAAATACCGCGTTTTCAAAGATCTGTGGAGGCGCGGAAAG
TACGTGACTTCCGGCGATGCATTTGGAGCGGACTTTCTGGTTTACCCCGG
CGATCCCATGATCTACCACGCCTCCCACATTGTAATTTTGCACGAGCAAC
CTGTAATTAAGCCCCTGGAACTGATAGCAAAAGTTCGTCTATCGGTAATT
GTCAACAAAAGCTGCGTTTTCGCCTACGAGATGGAAAATAATGAGGAAGA
AATACATTACCAAACGGTCGCATGGTGCAATCTTGGAAAAGCAAGCTTTC
TAGACCAT

BO27767.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:05:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG33260-RC 831 CG33260-PC 53..828 15..790 3880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG33260-RC 902 CG33260-RC 65..840 15..790 3880 100 Plus
Trl-RF 2613 CG33261-RF 1..406 385..790 2030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:05:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14760582..14760904 790..468 1615 100 Minus
3L 28110227 3L 14761292..14761552 359..99 1305 100 Minus
3L 28110227 3L 14760967..14761075 467..359 545 100 Minus
3L 28110227 3L 14761640..14761723 98..15 420 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:05:52 has no hits.

BO27767.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-23 15:57:15 Download gff for BO27767.complete
Subject Subject Range Query Range Percent Splice Strand
CG33260-RB 1..770 17..786 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:28 Download gff for BO27767.complete
Subject Subject Range Query Range Percent Splice Strand
CG33260-RC 67..836 17..786 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:10:50 Download gff for BO27767.complete
Subject Subject Range Query Range Percent Splice Strand
CG33260-RC 67..836 17..786 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:10:50 Download gff for BO27767.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14761292..14761552 99..359 100 <- Minus
3L 14761640..14761721 17..98 100   Minus
3L 14760967..14761074 360..467 100 <- Minus
3L 14760586..14760904 468..786 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:28 Download gff for BO27767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14753686..14754004 468..786 100 <- Minus
arm_3L 14754067..14754174 360..467 100 <- Minus
arm_3L 14754392..14754652 99..359 100 <- Minus
arm_3L 14754740..14754821 17..98 100   Minus

BO27767.pep Sequence

Translation from 16 to 808

> BO27767.pep
MELRSKHRIMGAPVGTANTKGWSPNQSTLPVELSKFETQLLLDENIAKLV
DKSKDLKAKPTAEKLEECKADFESRLLGQEEALKTEKLRETERYMDKILT
GKRKKLLKQGKNELAAALTDKDVLLEMSVNFKFDRQNALLEVHCEHPTDH
SAQIVTGPIVHTNSLKYRVFKDLWRRGKYVTSGDAFGADFLVYPGDPMIY
HASHIVILHEQPVIKPLELIAKVRLSVIVNKSCVFAYEMENNEEEIHYQT
VAWCNLGKASFLDH

BO27767.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:33:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG33260-PC 276 CG33260-PC 19..276 1..258 1338 100 Plus