BO27767.complete Sequence
808 bp assembled on 2010-09-23
> BO27767.complete
GAAGTTATCAGTCGACATGGAACTGCGGAGCAAACATCGCATAATGGGTG
CTCCAGTGGGCACAGCGAACACAAAAGGCTGGAGTCCTAATCAATCCACT
CTGCCCGTGGAGCTCAGTAAATTTGAAACCCAATTGCTTTTGGATGAGAA
TATAGCAAAGTTAGTTGATAAATCCAAAGATCTAAAGGCTAAACCCACTG
CCGAGAAACTTGAGGAGTGCAAGGCGGATTTTGAATCCCGGTTACTGGGA
CAGGAGGAAGCATTGAAAACGGAGAAACTACGGGAAACTGAACGATACAT
GGATAAGATTCTGACGGGAAAACGCAAGAAGTTGCTCAAGCAGGGCAAAA
ATGAATTGGCTGCCGCTCTGACTGATAAGGATGTACTATTGGAGATGTCT
GTGAATTTCAAATTCGATCGCCAAAATGCCTTGCTGGAGGTGCATTGTGA
ACATCCCACGGATCACTCTGCGCAAATAGTTACCGGTCCCATTGTGCACA
CCAATTCCCTGAAATACCGCGTTTTCAAAGATCTGTGGAGGCGCGGAAAG
TACGTGACTTCCGGCGATGCATTTGGAGCGGACTTTCTGGTTTACCCCGG
CGATCCCATGATCTACCACGCCTCCCACATTGTAATTTTGCACGAGCAAC
CTGTAATTAAGCCCCTGGAACTGATAGCAAAAGTTCGTCTATCGGTAATT
GTCAACAAAAGCTGCGTTTTCGCCTACGAGATGGAAAATAATGAGGAAGA
AATACATTACCAAACGGTCGCATGGTGCAATCTTGGAAAAGCAAGCTTTC
TAGACCAT
BO27767.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:05:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33260-RC | 831 | CG33260-PC | 53..828 | 15..790 | 3880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:05:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33260-RC | 902 | CG33260-RC | 65..840 | 15..790 | 3880 | 100 | Plus |
Trl-RF | 2613 | CG33261-RF | 1..406 | 385..790 | 2030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:05:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14760582..14760904 | 790..468 | 1615 | 100 | Minus |
3L | 28110227 | 3L | 14761292..14761552 | 359..99 | 1305 | 100 | Minus |
3L | 28110227 | 3L | 14760967..14761075 | 467..359 | 545 | 100 | Minus |
3L | 28110227 | 3L | 14761640..14761723 | 98..15 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:05:52 has no hits.
BO27767.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-23 15:57:15 Download gff for
BO27767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33260-RB | 1..770 | 17..786 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:28 Download gff for
BO27767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33260-RC | 67..836 | 17..786 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:10:50 Download gff for
BO27767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33260-RC | 67..836 | 17..786 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:10:50 Download gff for
BO27767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14761292..14761552 | 99..359 | 100 | <- | Minus |
3L | 14761640..14761721 | 17..98 | 100 | | Minus |
3L | 14760967..14761074 | 360..467 | 100 | <- | Minus |
3L | 14760586..14760904 | 468..786 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:28 Download gff for
BO27767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14753686..14754004 | 468..786 | 100 | <- | Minus |
arm_3L | 14754067..14754174 | 360..467 | 100 | <- | Minus |
arm_3L | 14754392..14754652 | 99..359 | 100 | <- | Minus |
arm_3L | 14754740..14754821 | 17..98 | 100 | | Minus |
BO27767.pep Sequence
Translation from 16 to 808
> BO27767.pep
MELRSKHRIMGAPVGTANTKGWSPNQSTLPVELSKFETQLLLDENIAKLV
DKSKDLKAKPTAEKLEECKADFESRLLGQEEALKTEKLRETERYMDKILT
GKRKKLLKQGKNELAAALTDKDVLLEMSVNFKFDRQNALLEVHCEHPTDH
SAQIVTGPIVHTNSLKYRVFKDLWRRGKYVTSGDAFGADFLVYPGDPMIY
HASHIVILHEQPVIKPLELIAKVRLSVIVNKSCVFAYEMENNEEEIHYQT
VAWCNLGKASFLDH
BO27767.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:33:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33260-PC | 276 | CG33260-PC | 19..276 | 1..258 | 1338 | 100 | Plus |