BO27768.complete Sequence
295 bp assembled on 2010-09-30
GenBank Submission: KX796220
> BO27768.complete
GAAGTTATCAGTCGACATGCTGCGCAAAACACCAAAACCTGCAATTTGGA
AATTCATCAAAGGAAGTGCCAAAACACTGTTTGTCCTCGAGGCAGTCTGC
TTCGCAGCCAGCTACGGCGTTTATTATCGCATGAACACGAATCGAGAGTT
TCGTCAGCATATTCACGAGAACTATCCCTTCGTTTTGGACTATTACTACA
AAATTGGTGAAATCGTCGGAGACAGCACAGTGCGACAGGCGGATGCGAGT
TATTGGAGTGCTTTGAAGAAAAGCGACGCAAGCTTTCTAGACCAT
BO27768.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:15:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42371-RA | 264 | CG42371-PA | 1..261 | 17..277 | 1305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:15:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42371-RA | 691 | CG42371-RA | 105..365 | 17..277 | 1305 | 100 | Plus |
CG15386-RA | 691 | CG15386-RA | 105..365 | 17..277 | 1305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:15:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2216829..2216961 | 277..145 | 665 | 100 | Minus |
2L | 23513712 | 2L | 2217013..2217142 | 146..17 | 650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:15:18 has no hits.
BO27768.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-30 16:20:30 Download gff for
BO27768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42371-RA | 90..350 | 17..279 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:40 Download gff for
BO27768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15386-RA | 105..365 | 17..279 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:07 Download gff for
BO27768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15386-RA | 105..365 | 17..279 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:07 Download gff for
BO27768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2217013..2217142 | 17..146 | 100 | | Minus |
2L | 2216827..2216959 | 147..279 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:40 Download gff for
BO27768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2216827..2216959 | 147..279 | 98 | <- | Minus |
arm_2L | 2217013..2217142 | 17..146 | 100 | | Minus |
BO27768.pep Sequence
Translation from 16 to 295
> BO27768.pep
MLRKTPKPAIWKFIKGSAKTLFVLEAVCFAASYGVYYRMNTNREFRQHIH
ENYPFVLDYYYKIGEIVGDSTVRQADASYWSALKKSDASFLDH
BO27768.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:34:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42371-PA | 87 | CG42371-PA | 1..87 | 1..87 | 465 | 100 | Plus |