Clone BO27769 Report

Search the DGRC for BO27769

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:277
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG13877-RC
Protein status:BO27769.pep: Imported from assembly
Sequenced Size:355

Clone Sequence Records

BO27769.complete Sequence

355 bp assembled on 2010-09-30

GenBank Submission: KX798039

> BO27769.complete
GAAGTTATCAGTCGACATGGTTTACATATGCACTCTTGTGGTGTTGATCT
TTCCCGTCTTGTTGTTGGGTGCACCATGGGAAGGGTCGCATCCTAAGTCT
CAGGTGGAATACATCAGCAACGACAAGAGAGTTGATTCTGGCTTCGCCAA
CCCCAATATCGTGCCCATCACCCAGCCGTCGGTCGTAACGCAAACAGCTC
CTCCTCCGCCGCCAAATTCCAAAAACTTTGCATATAGTCCGATGACGCAG
AGCTGGACCCTCATTGCGCCAGGCGATCCGCTGCCCAATAATGACACCCT
CGTCTGGAACCAGAGCAATGACAAATGGCTCACTCGCGCAAGCTTTCTAG
ACCAT

BO27769.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG13877-RC 324 CG13877-PC 1..321 17..337 1605 100 Plus
CG13877-RB 327 CG13877-PB 1..324 17..337 1540 99.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG13877-RC 416 CG13877-RC 20..340 17..337 1605 100 Plus
CG13877-RB 507 CG13877-RB 113..436 17..337 1540 99.1 Plus
pyx-RB 2502 CG17142-RB 1947..2251 337..33 1525 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:15:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 218283..218587 33..337 1525 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:15:04 has no hits.

BO27769.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-30 16:20:29 Download gff for BO27769.complete
Subject Subject Range Query Range Percent Splice Strand
CG13877-RA 114..434 17..339 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:35 Download gff for BO27769.complete
Subject Subject Range Query Range Percent Splice Strand
CG13877-RC 20..340 17..339 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:02 Download gff for BO27769.complete
Subject Subject Range Query Range Percent Splice Strand
CG13877-RC 20..340 17..339 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:02 Download gff for BO27769.complete
Subject Subject Range Query Range Percent Splice Strand
3L 218180..218195 17..32 100 -> Plus
3L 218283..218587 33..339 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:35 Download gff for BO27769.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 218180..218195 17..32 100 -> Plus
arm_3L 218283..218587 33..339 99   Plus

BO27769.pep Sequence

Translation from 16 to 355

> BO27769.pep
MVYICTLVVLIFPVLLLGAPWEGSHPKSQVEYISNDKRVDSGFANPNIVP
ITQPSVVTQTAPPPPPNSKNFAYSPMTQSWTLIAPGDPLPNNDTLVWNQS
NDKWLTRASFLDH

BO27769.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:34:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG13877-PC 107 CG13877-PC 1..107 1..107 584 100 Plus
CG13877-PB 108 CG13877-PB 1..108 1..107 572 99.1 Plus