BO27770.complete Sequence
355 bp assembled on 2010-08-18
GenBank Submission: KX796772
> BO27770.complete
GAAGTTATCAGTCGACATGGTTTACATATGCACTCTTGTGGTGTTGATCT
TTCCCGTCTTGTTGTTGGGTGCACCATGGGAAGGGTCGCATCCTAAGTCT
CAGGTGGAATACATCAGCAACGACAAGAGAGTTGATTCTGGCTTCGCCAA
CCCCAATATCGTGCCCATCACCCAGCCGTCGGTCGTAACGCAAACAGCTC
CTCCTCCGCCGCCAAATTCCAAAAACTTTGCATATAGTCCGATGACGCAG
AGCTGGACCCTCATTGCGCCAGGCGATCCGCTGCCCAATAATGACACCCT
CGTCTGGAACCAGAGCAATGACAAATGGCTCACTCGCGCAAGCTTTCTAG
ACCAT
BO27770.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:38:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13877-RC | 324 | CG13877-PC | 1..321 | 17..337 | 1605 | 100 | Plus |
CG13877-RB | 327 | CG13877-PB | 1..324 | 17..337 | 1540 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:38:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13877-RC | 416 | CG13877-RC | 20..340 | 17..337 | 1605 | 100 | Plus |
CG13877-RB | 507 | CG13877-RB | 113..436 | 17..337 | 1540 | 99.1 | Plus |
pyx-RB | 2502 | CG17142-RB | 1947..2251 | 337..33 | 1525 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 218283..218587 | 33..337 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:37:59 has no hits.
BO27770.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:03 Download gff for
BO27770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13877-RA | 114..434 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:33 Download gff for
BO27770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13877-RC | 20..340 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:25 Download gff for
BO27770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13877-RC | 20..340 | 17..339 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:25 Download gff for
BO27770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 218180..218195 | 17..32 | 100 | -> | Plus |
3L | 218283..218587 | 33..339 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:33 Download gff for
BO27770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 218180..218195 | 17..32 | 100 | -> | Plus |
arm_3L | 218283..218587 | 33..339 | 99 | | Plus |
BO27770.pep Sequence
Translation from 16 to 355
> BO27770.pep
MVYICTLVVLIFPVLLLGAPWEGSHPKSQVEYISNDKRVDSGFANPNIVP
ITQPSVVTQTAPPPPPNSKNFAYSPMTQSWTLIAPGDPLPNNDTLVWNQS
NDKWLTRASFLDH
BO27770.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13877-PC | 107 | CG13877-PC | 1..107 | 1..107 | 584 | 100 | Plus |
CG13877-PB | 108 | CG13877-PB | 1..108 | 1..107 | 572 | 99.1 | Plus |