BO27771.complete Sequence
514 bp assembled on 2010-08-18
GenBank Submission: KX793786
> BO27771.complete
GAAGTTATCAGTCGACATGGAGTCAATTAGCAGCATGATTTATTTAGTGG
CCATGATGTCATTGATCATCGGTGGCAGCCAAGCGATTCCTTATCGACCC
TCGGCGTATCTGTACAATCAGCAGTACTGTATGGATACATTGACGGGTCG
GCAGCTTTATATCGGTGAAGTCTTCACGCGAGAGGATCAGTGCGTCCGCA
TCCAATGCCTGGAAACGCTGCAACTCTGGGAGGATAGCTGCCAGGTGCCG
AAACTGACGCAGGGCAATTGCACGCCAGTTCCATCGACGAACCCGCATGC
CGAATATCCCCGATGCTGCCCACTGTATGAGTGCAAGAGCTACGAGTCGA
ATTCGGGGGGAACTCTGGAGCAGACCAACATATATGACCACTATGGTACT
CTGCGATCATCCCATCTCACTGAGATGATAGTGATCGACGGGCGGACACC
CCCTCGTGGCGAGATTCACACGGCGTCGGCGAGGAAGTATCAGGTGGCAA
GCTTTCTAGACCAT
BO27771.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:37:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vago-RD | 483 | CG2081-PD | 1..480 | 17..496 | 2400 | 100 | Plus |
Vago-RB | 483 | CG2081-PB | 1..480 | 17..496 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vago-RD | 796 | CG2081-RD | 82..561 | 17..496 | 2400 | 100 | Plus |
Vago-RB | 684 | CG2081-RB | 82..561 | 17..496 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11089724..11089984 | 236..496 | 1305 | 100 | Plus |
X | 23542271 | X | 11089521..11089659 | 99..237 | 695 | 100 | Plus |
X | 23542271 | X | 11089371..11089452 | 17..98 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:37:01 has no hits.
BO27771.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:54:50 Download gff for
BO27771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vago-RB | 82..561 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:08 Download gff for
BO27771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vago-RB | 82..561 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:03 Download gff for
BO27771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vago-RB | 82..561 | 17..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:03 Download gff for
BO27771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11089521..11089659 | 99..237 | 100 | -> | Plus |
X | 11089726..11089984 | 238..498 | 99 | | Plus |
X | 11089371..11089452 | 17..98 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:08 Download gff for
BO27771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10983554..10983692 | 99..237 | 100 | -> | Plus |
arm_X | 10983759..10984017 | 238..498 | 99 | | Plus |
arm_X | 10983404..10983485 | 17..98 | 100 | -> | Plus |
BO27771.pep Sequence
Translation from 16 to 514
> BO27771.pep
MESISSMIYLVAMMSLIIGGSQAIPYRPSAYLYNQQYCMDTLTGRQLYIG
EVFTREDQCVRIQCLETLQLWEDSCQVPKLTQGNCTPVPSTNPHAEYPRC
CPLYECKSYESNSGGTLEQTNIYDHYGTLRSSHLTEMIVIDGRTPPRGEI
HTASARKYQVASFLDH
BO27771.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:10:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vago-PD | 160 | CG2081-PD | 1..160 | 1..160 | 864 | 100 | Plus |
Vago-PB | 160 | CG2081-PB | 1..160 | 1..160 | 864 | 100 | Plus |