BO27773.complete Sequence
490 bp assembled on 2010-08-18
GenBank Submission: KX798120
> BO27773.complete
GAAGTTATCAGTCGACATGGCCAGCCCCGTGGAACTGCTAAGCCTCTCCA
ATCCCGTCTTCAAGAGTTTCACCTTTTGGGTCGGAGTTTTGGTGATCAAA
ATGCTGCTGATGAGCCTTCTGACAGCCATCCAGCGTTTCAAGACGAAGAC
CTTCGCCAACCCCGAGGACCTGATGTCCCCCAAGCTGAAGGTCAAGTTCG
ACGATCCGAACGTGGAGCGTGTGCGCCGTGCCCACCGCAACGACCTGGAG
AACATCCTGCCCTTCTTCGCCATCGGTCTGCTCTACGTCCTGACTGATCC
GGCCGCCTTTCTGGCCATCAACCTGTTCCGCGCCGTGGGCATCGCCCGCA
TCGTCCACACACTGGTCTACGCCGTGGTCGTGGTGCCCCAGCCTTCCCGT
GCCCTCGCCTTCTTCGTGGCCTTGGGCGCCACCGTCTACATGGCCCTGCA
GGTCATCGCCTCGGCCGCCTTCGCAAGCTTTCTAGACCAT
BO27773.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:38:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mgstl-RA | 459 | CG1742-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
| Mgstl-RC | 456 | CG1742-PC | 130..453 | 149..472 | 1620 | 100 | Plus |
| Mgstl-RB | 456 | CG1742-PB | 130..453 | 149..472 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:38:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mgstl-RA | 660 | CG1742-RA | 101..556 | 17..472 | 2280 | 100 | Plus |
| Mgstl-RC | 951 | CG1742-RC | 524..847 | 149..472 | 1620 | 100 | Plus |
| Mgstl-RB | 591 | CG1742-RB | 164..487 | 149..472 | 1620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:38:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22226213..22226668 | 17..472 | 2040 | 96.5 | Plus |
| X | 23542271 | X | 21043678..21044003 | 147..472 | 1630 | 100 | Plus |
| X | 23542271 | X | 21043170..21043301 | 17..148 | 660 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:38:11 has no hits.
BO27773.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:06 Download gff for
BO27773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mgstl-RA | 99..554 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:37 Download gff for
BO27773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mgstl-RA | 101..556 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:28 Download gff for
BO27773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mgstl-RA | 101..556 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:28 Download gff for
BO27773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22226213..22226668 | 17..474 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:37 Download gff for
BO27773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22226213..22226668 | 17..474 | 96 | | Plus |
BO27773.pep Sequence
Translation from 16 to 490
> BO27773.pep
MASPVELLSLSNPVFKSFTFWVGVLVIKMLLMSLLTAIQRFKTKTFANPE
DLMSPKLKVKFDDPNVERVRRAHRNDLENILPFFAIGLLYVLTDPAAFLA
INLFRAVGIARIVHTLVYAVVVVPQPSRALAFFVALGATVYMALQVIASA
AFASFLDH
BO27773.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mgstl-PA | 152 | CG1742-PA | 1..152 | 1..152 | 749 | 100 | Plus |
| Mgstl-PC | 151 | CG1742-PC | 5..151 | 6..152 | 614 | 83 | Plus |
| Mgstl-PB | 151 | CG1742-PB | 5..151 | 6..152 | 614 | 83 | Plus |
| CG33178-PC | 165 | CG33178-PC | 12..157 | 1..146 | 446 | 61 | Plus |
| CG33178-PA | 165 | CG33178-PA | 12..157 | 1..146 | 446 | 61 | Plus |
