BO27776.complete Sequence
334 bp assembled on 2010-08-18
GenBank Submission: KX796469
> BO27776.complete
GAAGTTATCAGTCGACATGACGAATTATGAGAACATTATAAATTTGCCAT
TAAACTTTAATGCAAATAATCACGCCGCTGGTAATAATGAGAACAATGCC
AAAATTGCCATCGTTGGCGAGCAGCTGCTGAATAAGATGTCGCAGCGGGA
TTTCTCCGAAAGCGGCGCTCCCTACCGCCGAAGAACTTCTTCGTTGGCCA
TTTGGAGGGCATGTTCCTGCTCTCTGTGCGTGTTATTTGACTTTGACCAT
TGGCAGCAGAAACGCCATATCATGTCTGCGAGATCTACTCGGCTAGCACC
GCCAACGCTCGGAAGAGCAAGCTTTCTAGACCAT
BO27776.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:38:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43163-RC | 7572 | CG43163-PC | 1..145 | 17..161 | 725 | 100 | Plus |
CG43163-RD | 7572 | CG43163-PD | 1..145 | 17..161 | 725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:38:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43163-RC | 7878 | CG43163-RC | 107..251 | 17..161 | 725 | 100 | Plus |
CG43163-RD | 7970 | CG43163-RD | 199..343 | 17..161 | 725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:38:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8491308..8491463 | 316..161 | 780 | 100 | Minus |
3L | 28110227 | 3L | 8494119..8494262 | 160..17 | 720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:38:17 has no hits.
BO27776.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:07 Download gff for
BO27776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6902-RA | 50..349 | 17..318 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:39 Download gff for
BO27776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43163-RD | 199..343 | 17..161 | 100 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:31 Download gff for
BO27776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43163-RD | 199..343 | 17..161 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:31 Download gff for
BO27776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8491305..8491463 | 161..318 | 98 | <- | Minus |
3L | 8494119..8494262 | 17..160 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:39 Download gff for
BO27776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8484405..8484563 | 161..318 | 98 | <- | Minus |
arm_3L | 8487219..8487362 | 17..160 | 100 | | Minus |
BO27776.pep Sequence
Translation from 16 to 334
> BO27776.pep
MTNYENIINLPLNFNANNHAAGNNENNAKIAIVGEQLLNKMSQRDFSESG
APYRRRTSSLAIWRACSCSLCVLFDFDHWQQKRHIMSARSTRLAPPTLGR
ASFLDH
BO27776.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43163-PC | 2523 | CG43163-PC | 1..49 | 1..49 | 249 | 98 | Plus |
CG43163-PD | 2523 | CG43163-PD | 1..49 | 1..49 | 249 | 98 | Plus |