BO27791.complete Sequence
559 bp assembled on 2010-08-18
GenBank Submission: KX798799
> BO27791.complete
GAAGTTATCAGTCGACATGTCGGCGTTTGTGAAAACCGTGTGCTTGGCCC
AAAAGCTGTGCGCCGCCAATCCCGTCGTGGCTCGCCAGGCGATCCGCAGC
ATGGCTGGCTGGAATAAGGACTACAAGCCGGGTCCGTATCCACAGACGGA
GAAGGAGCGCCTGGCGGCGGCCAAGAAGTACTATCTGTTGCCGGAGGAGT
ACAAACCGTATGCGGACGATGGTCTGGGCTACGGAGATTATCCCAAATTG
GGCTACGGTCTGGGTGTGGAGGCCAAGGACTCGTACTATCCCTGGGACTA
TCCGGAGCACAAGCGCAACCAACACGAGCCCATCTCGGCGGATCATGATC
TGTACAGCGAGGATCGCTGGTCGCAGGCCGAACCGCCACGCTACAGCAAT
GCGTACTACTTTGCCTGCTTCCTGGGCGTGATGTCCGGCTGCCTGGCACT
CTACTACTGGCTGGATGACAAGAAGATGTACCGCCCCGTGGCCGCCAAGC
AATATCCCAGCCCTGGCGTCAAGCACTACACCTTCGAGAAGGCAAGCTTT
CTAGACCAT
BO27791.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:38:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3192-RC | 528 | CG3192-PC | 1..525 | 17..541 | 2625 | 100 | Plus |
CG3192-RB | 528 | CG3192-PB | 1..525 | 17..541 | 2625 | 100 | Plus |
CG3192-RA | 528 | CG3192-PA | 1..525 | 17..541 | 2625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:38:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3192-RC | 706 | CG3192-RC | 78..602 | 17..541 | 2625 | 100 | Plus |
CG3192-RB | 805 | CG3192-RB | 177..701 | 17..541 | 2625 | 100 | Plus |
CG3192-RA | 1321 | CG3192-RA | 693..1217 | 17..541 | 2625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:38:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6677652..6677881 | 331..102 | 1150 | 100 | Minus |
X | 23542271 | X | 6677366..6677575 | 541..332 | 1050 | 100 | Minus |
X | 23542271 | X | 6678000..6678084 | 101..17 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:38:31 has no hits.
BO27791.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:10 Download gff for
BO27791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3192-RA | 693..1217 | 17..543 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:42 Download gff for
BO27791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3192-RA | 693..1217 | 17..543 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:36 Download gff for
BO27791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3192-RA | 693..1217 | 17..543 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:36 Download gff for
BO27791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6677364..6677575 | 332..543 | 99 | <- | Minus |
X | 6677652..6677881 | 102..331 | 100 | <- | Minus |
X | 6678000..6678084 | 17..101 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:42 Download gff for
BO27791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6571397..6571608 | 332..543 | 99 | <- | Minus |
arm_X | 6571685..6571914 | 102..331 | 100 | <- | Minus |
arm_X | 6572033..6572117 | 17..101 | 100 | | Minus |
BO27791.pep Sequence
Translation from 16 to 559
> BO27791.pep
MSAFVKTVCLAQKLCAANPVVARQAIRSMAGWNKDYKPGPYPQTEKERLA
AAKKYYLLPEEYKPYADDGLGYGDYPKLGYGLGVEAKDSYYPWDYPEHKR
NQHEPISADHDLYSEDRWSQAEPPRYSNAYYFACFLGVMSGCLALYYWLD
DKKMYRPVAAKQYPSPGVKHYTFEKASFLDH
BO27791.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3192-PC | 175 | CG3192-PC | 1..175 | 1..175 | 978 | 100 | Plus |
CG3192-PB | 175 | CG3192-PB | 1..175 | 1..175 | 978 | 100 | Plus |
CG3192-PA | 175 | CG3192-PA | 1..175 | 1..175 | 978 | 100 | Plus |