BO27792.complete Sequence
1609 bp assembled on 2010-10-15
GenBank Submission: KX799492
> BO27792.complete
GAAGTTATCAGTCGACATGGATGTGGATTTACTGCCGCTGAGAAAGCGAA
TAACGAACACTTTCAAGTTATGTGGATTCCTGATCCGCTCGGAGAACAGT
TCCTACCTGGCGGAGCAGCTGCTGCCCTTCGACGCAGCGGAACGGGACAA
ATGGCTGACGGTGATCACCGAGAATCTCCAAAGCCAAAAGCTTTTGACGC
CTCATGTGGAGCGAGCCGCCCTGGAGAAGGCTATCAATGAACTTAACCGG
GTGGGATTGGATGAAGGGGAGACGGTCTTTGCCCTGATCGATGCCTTTAC
GGTGCCCCGTTTTCGGTACAACCAGCGGATAAAGAAATTCGAACTGGACA
CACAGCCGCGCCAGTTGCTGACCGCTCCGCGCATGAAATCGGACTACATG
CAGCAACGATATGCCATGTTACTACAGAAAACTCTGCGACACGACCTCTT
TGCCCCAGCCGTCATCCAGGATGGCGTTGGAGCCGAGGCCCAGGCCAAGA
AATTTAAGCTCCAGTTCGCTGAGAACCTGCTGGCCACGTCGGCGATGAAG
GAGGCAGTTGTTTTGGGACTACTTACCCAGCTTAAGGAGGGCAAGTTCTA
TGTCGAGGATCCCACGGGTTGCGTCCAGTTAGATCTCACTGGAGCCCGTT
TCCATGCCGGCTTCTTCTGCGAGGGCTGCTTTGTTTTAGCCGAGGGCAAC
TATAACAACGGTGTGCTCAAGGTTGATGGCCTGGGCTTTCCACCCGCGGA
ACCGGCAAACAGCAGTCGAGCATTTTTCGGCACCGCCAACACTTGGGGCG
GTGAATCTGCTAAGCTGCTGAAGTACTCAGCCGGACTACAGGAACTGGAG
CGTACCAACACGGAAACAACCATTGTTTTCCTTTCCGACGTACGGTTGGA
TCTGCCGGTTGTCATGGAGAAGCTGCGCCAGTTGTTCGTGGGCTATGATT
CCTGCCCGCCGCAAGCTATAGTGCTCATGGGCCCCTTCACGGCCAGCACA
AGGAATCATCATGAGCTGAGGCATCACCTAGATGCATTGGGTGGCTTGGC
AGCTGGCTGCGAGCAGCTGAAGAAGCAAACGGATCTGATACTTGTTCCCT
CGTCTGAAGATCCCACGGCACCTAATATTCTGCCTCGTGCTCCAATTCCC
GAATGCCTGGCAGCCGGGCTGCTAAAGGCCTGGCCACGCACCCAGTTGGC
TACGAATCCGTGTCGCCTACAGTACTGCACCCAGCAGATTGTGGTCTGCC
GTCTGGATTTAATGGCCAAGTTTTGTCGCAACACCTTGCATTTTCCCGAA
GATACGTCCCAGATCGAGCAGCATTTTGCCAGAACGATTGTGTGCCAGGG
TCATTTGGTGCCCATTCATCCGATTGCCATGCCAGTGCACTGGGACTACG
ATCCTGCTTTGTGGTTGTATCCACTGCCGGATCTTATTGTCATGGGCGAT
TCGTGCCAGAGCTTTAGCAGCAGTCAACATGGCTGCACTGTTCTCAATAC
CGGCTCCTTTGTCAAGTCCAAGTTCGCATTCAAAGTGTATATACCAGCGA
CGCGAACGATTGAGGACTCGGAAATACCGGACGAATTGGAGGCAAGCTTT
CTAGACCAT
BO27792.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:02:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNApol-epsilon58-RA | 1578 | CG10489-PA | 1..1575 | 17..1591 | 7395 | 98 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:02:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNApol-epsilon58-RA | 1688 | CG10489-RA | 57..1631 | 17..1591 | 7395 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:02:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5895748..5896617 | 1591..722 | 4080 | 97.9 | Minus |
3L | 28110227 | 3L | 5896674..5897379 | 722..17 | 3320 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:02:43 has no hits.
BO27792.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-15 09:23:01 Download gff for
BO27792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pole2-RA | 1..1575 | 17..1593 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:28:21 Download gff for
BO27792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pole2-RA | 57..1631 | 17..1593 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:16 Download gff for
BO27792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-epsilon58-RA | 57..1631 | 17..1593 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:16 Download gff for
BO27792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5895746..5896616 | 723..1593 | 97 | <- | Minus |
3L | 5896674..5897379 | 17..722 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:28:21 Download gff for
BO27792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5888846..5889716 | 723..1593 | 97 | <- | Minus |
arm_3L | 5889774..5890479 | 17..722 | 98 | | Minus |
BO27792.pep Sequence
Translation from 16 to 1609
> BO27792.pep
MDVDLLPLRKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVI
TENLQSQKLLTPHVERAALEKAINELNRVGLDEGETVFALIDAFTVPRFR
YNQRIKKFELDTQPRQLLTAPRMKSDYMQQRYAMLLQKTLRHDLFAPAVI
QDGVGAEAQAKKFKLQFAENLLATSAMKEAVVLGLLTQLKEGKFYVEDPT
GCVQLDLTGARFHAGFFCEGCFVLAEGNYNNGVLKVDGLGFPPAEPANSS
RAFFGTANTWGGESAKLLKYSAGLQELERTNTETTIVFLSDVRLDLPVVM
EKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGLAAGCEQ
LKKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCR
LQYCTQQIVVCRLDLMAKFCRNTLHFPEDTSQIEQHFARTIVCQGHLVPI
HPIAMPVHWDYDPALWLYPLPDLIVMGDSCQSFSSSQHGCTVLNTGSFVK
SKFAFKVYIPATRTIEDSEIPDELEASFLDH
BO27792.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:11:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNApol-epsilon58-PA | 525 | CG10489-PA | 1..525 | 1..525 | 2751 | 100 | Plus |