BO27849.complete Sequence
997 bp assembled on 2010-10-13
GenBank Submission: KX799922
> BO27849.complete
GAAGTTATCAGTCGACATGCATAACAACAGCTGTTTAGAACCCATGGACA
GGACCAAGACTACGAAACTTCCTCAGCTCAAGTCCAGCGTTACTCCCTAC
AGACCAAAGCCGAACCTAATCCGTAGTGATTCCCCGAAATTAGAGAACGA
TAAGCGTAATGGGCTGGACTTGGAGCTTCTGGATAATCCAGAGATACCGA
GCGTAAAGCGAGTACGATGGGCTCCGATGTATGGGGAAAGGAGCCCGAGT
AAGACCGGCTTTACCAGCGTTCCACTAAGCTCCAAAAAGGCGCAGTTTGA
TCATGATACGACAGATGAGTTAATACTGGCTAACGAGCTTCGATTAGCGG
TGCATCGTGGGGGAGGTTCCATAGATCCCGACAAGAACTACGAGCTGAGG
GCTCGACTGTCGCCCTTGCAATTGCCGTACAGTCGAGTGCAGCGAATTCT
GAAGGAGTGCGAGTTGAGCGAGAGGAATCATCACACCTATAGTATACCCA
TGGACTATGGGCGGCAATTGGTTGCCATGGTTTGCAAGATCAGGACGGAT
AATCTCCCCGAACTGAAACTTCGCTTGGCCTCCTTACTGCGGCAAAACAA
AGCGCGCTTCTTCAATCGACATTTATTCAACGAAACTGGCTTGATTGAGG
CCACATTGCCGAGCGTAACACCATTAAGCTTTGAGGAATTCAATCAAACG
TTGCGAATTGATGCTTTGTGGTGCAAAGCCACCGATAGTACCATTACCGA
TTTGGCCAAAGGATCTGTTTTGTTCAAATGTCGGCCTCTGGACCTGCAAG
AGGTCGCGTACAAACTCAGGCAGTGCAACTACAAGATTGTACATAAGGAG
GTTGGACACTGTCCAAACAAGCCGCTCGTCGAGTTAAATGATCGTCAAAT
GGCCCGCTATCAGGAGTTTCGTAAAAACCTTCTTCAAGACATAGATGTCG
TAAAGATCTATGACAATGTGCGTGTCCAGGCAAGCTTTCTAGACCAT
BO27849.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:59:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31244-RA | 966 | CG31244-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:59:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31244-RA | 1138 | CG31244-RA | 86..1048 | 17..979 | 4815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:59:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19397520..19398482 | 979..17 | 4815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:59:41 has no hits.
BO27849.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-13 16:52:32 Download gff for
BO27849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31244-RA | 86..1048 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:28:01 Download gff for
BO27849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31244-RA | 86..1048 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:16 Download gff for
BO27849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31244-RA | 86..1048 | 17..981 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:16 Download gff for
BO27849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19397518..19398482 | 17..981 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:28:01 Download gff for
BO27849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15223240..15224204 | 17..981 | 99 | | Minus |
BO27849.pep Sequence
Translation from 16 to 997
> BO27849.pep
MHNNSCLEPMDRTKTTKLPQLKSSVTPYRPKPNLIRSDSPKLENDKRNGL
DLELLDNPEIPSVKRVRWAPMYGERSPSKTGFTSVPLSSKKAQFDHDTTD
ELILANELRLAVHRGGGSIDPDKNYELRARLSPLQLPYSRVQRILKECEL
SERNHHTYSIPMDYGRQLVAMVCKIRTDNLPELKLRLASLLRQNKARFFN
RHLFNETGLIEATLPSVTPLSFEEFNQTLRIDALWCKATDSTITDLAKGS
VLFKCRPLDLQEVAYKLRQCNYKIVHKEVGHCPNKPLVELNDRQMARYQE
FRKNLLQDIDVVKIYDNVRVQASFLDH
BO27849.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:09:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31244-PA | 321 | CG31244-PA | 1..321 | 1..321 | 1681 | 100 | Plus |
CG4957-PA | 246 | CG4957-PA | 28..243 | 104..318 | 161 | 24.7 | Plus |