BO27859.complete Sequence
778 bp assembled on 2010-09-30
GenBank Submission: KX796898
> BO27859.complete
GAAGTTATCAGTCGACATGTCGACAGTCGATAAGGAAGAGCTGGTCCAGA
AGGCTAAACTGGCCGAGCAGTCAGAACGTTACGATGATATGGCCCAGGCC
ATGAAGTCCGTCACAGAGACTGGCGTTGAGCTCTCAAATGAGGAAAGAAA
TCTGCTCTCCGTTGCCTACAAAAATGTGGTCGGTGCCCGCAGGTCATCGT
GGCGTGTCATCTCCTCCATTGAGCAGAAAACCGAAGCATCCGCTAGAAAA
CAGCAGCTCGCCCGTGAGTACAGAGAGCGTGTGGAGAAGGAGCTGAGGGA
AATCTGCTACGAAGTTTTGGGACTTCTGGACAAATACCTTATTCCAAAAG
CCAGCAATCCCGAGAGCAAGGTGTTTTACCTGAAGATGAAGGGTGATTAC
TACAGGTATTTAGCCGAGGTTGCCACAGGAGATGCACGCAACACCGTCGT
TGATGACTCGAAAAATGCCTATCAGGAGGCGTTCGATATTGCAAAAACCA
AAATGCAGCCCACGCATCCCATCCGTTTGGGTCTGGCCCTTAACTTCTCA
GTCTTCTACTATGAGATTTTGAACTCACCAGACAAAGCTTGCCAATTGGC
TAAACAGGCGTTCGATGATGCGATAGCCGAGCTGGACACACTGAACGAGG
ACTCCTACAAGGACTCGACACTCATCATGCAGCTGTTGAGGGACAACCTG
ACTCTCTGGACGTCCGACACCCAAGGCGACGAAGCTGAGCCACAGGAGGG
CGGCGACAACGCAAGCTTTCTAGACCAT
BO27859.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3zeta-RI | 747 | CG17870-PI | 1..744 | 17..760 | 3690 | 99.7 | Plus |
| 14-3-3zeta-RA | 747 | CG17870-PA | 1..744 | 17..760 | 3690 | 99.7 | Plus |
| 14-3-3zeta-RG | 747 | CG17870-PG | 1..744 | 17..760 | 3690 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:16:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3zeta-RI | 974 | CG17870-RI | 155..898 | 17..760 | 3690 | 99.7 | Plus |
| 14-3-3zeta-RA | 1753 | CG17870-RA | 155..898 | 17..760 | 3690 | 99.7 | Plus |
| 14-3-3zeta-RG | 3046 | CG17870-RG | 235..978 | 17..760 | 3690 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:16:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10106289..10106453 | 444..608 | 795 | 98.8 | Plus |
| 2R | 25286936 | 2R | 10107464..10107619 | 605..760 | 780 | 100 | Plus |
| 2R | 25286936 | 2R | 10104938..10105068 | 190..320 | 655 | 100 | Plus |
| 2R | 25286936 | 2R | 10105701..10105825 | 319..443 | 625 | 100 | Plus |
| 2R | 25286936 | 2R | 10104716..10104832 | 78..194 | 585 | 100 | Plus |
| 2R | 25286936 | 2R | 10105941..10106105 | 444..608 | 525 | 87.9 | Plus |
| 2R | 25286936 | 2R | 10106634..10106798 | 444..608 | 450 | 84.8 | Plus |
| 3R | 32079331 | 3R | 18247974..18248137 | 554..717 | 355 | 81.1 | Plus |
| 2R | 25286936 | 2R | 10104348..10104409 | 17..78 | 310 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 08:16:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dnet\R1B | 2038 | Dnet\R1B NETR1B 2038bp | 1212..1273 | 360..299 | 112 | 64.5 | Minus |
BO27859.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-30 16:20:31 Download gff for
BO27859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3zeta-RG | 239..982 | 17..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:45 Download gff for
BO27859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3zeta-RG | 235..978 | 17..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:25 Download gff for
BO27859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3zeta-RG | 235..978 | 17..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:25 Download gff for
BO27859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10104348..10104409 | 17..78 | 100 | -> | Plus |
| 2R | 10104717..10104830 | 79..192 | 100 | -> | Plus |
| 2R | 10104941..10105067 | 193..319 | 100 | -> | Plus |
| 2R | 10105702..10105825 | 320..443 | 100 | -> | Plus |
| 2R | 10106289..10106452 | 444..607 | 98 | -> | Plus |
| 2R | 10107467..10107619 | 608..762 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:45 Download gff for
BO27859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5991853..5991914 | 17..78 | 100 | -> | Plus |
| arm_2R | 5992222..5992335 | 79..192 | 100 | -> | Plus |
| arm_2R | 5992446..5992572 | 193..319 | 100 | -> | Plus |
| arm_2R | 5993207..5993330 | 320..443 | 100 | -> | Plus |
| arm_2R | 5993794..5993957 | 444..607 | 98 | -> | Plus |
| arm_2R | 5994972..5995124 | 608..762 | 98 | | Plus |
BO27859.pep Sequence
Translation from 16 to 778
> BO27859.pep
MSTVDKEELVQKAKLAEQSERYDDMAQAMKSVTETGVELSNEERNLLSVA
YKNVVGARRSSWRVISSIEQKTEASARKQQLAREYRERVEKELREICYEV
LGLLDKYLIPKASNPESKVFYLKMKGDYYRYLAEVATGDARNTVVDDSKN
AYQEAFDIAKTKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFD
DAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDEAEPQEGGDNAS
FLDH
BO27859.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:34:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3zeta-PI | 248 | CG17870-PI | 1..248 | 1..248 | 1255 | 100 | Plus |
| 14-3-3zeta-PA | 248 | CG17870-PA | 1..248 | 1..248 | 1255 | 100 | Plus |
| 14-3-3zeta-PG | 248 | CG17870-PG | 1..248 | 1..248 | 1255 | 100 | Plus |
| 14-3-3zeta-PH | 248 | CG17870-PH | 1..248 | 1..248 | 1255 | 100 | Plus |
| 14-3-3zeta-PB | 248 | CG17870-PB | 1..248 | 1..248 | 1255 | 100 | Plus |
