Clone BO27946 Report

Search the DGRC for BO27946

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:279
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptOsi11-RA
Protein status:BO27946.pep: Imported from assembly
Sequenced Size:940

Clone Sequence Records

BO27946.complete Sequence

940 bp assembled on 2011-06-23

GenBank Submission: KX796491

> BO27946.complete
GAAGTTATCAGTCGACATGGAATCGCGTCTGGGTCTGCTCATCGCCCTGC
TGCTGGCGGCCTTTCAGGCCTGGGCCATGGAAGCACCGTCGAACTATAAT
CAGAACTCTACTGAGAGTGGACTGCTGCGGACAGTGCGTCATATCTATGG
GCAGTGTGCATATAGCGAGGACGTTTTCTGGTGCTGCAAGATACAGGGAG
TTCGCCTGCTGGGACGGGCTCTGAAGGTCCCTCAACTGGGGATTGTGGAT
GGCGTTAGCTTGGTGCGGCGGGAATCCTTTACCCAGGACACGCGGAGTGG
ACGCTCTAGCCTGCTCGAGAGCCAGCTCAGCAATCGCGATCTCGAGCACT
TGTCGGGGAAGAGTCTGGACGCCCTGCTGCTGGAGCGGTTCCTCAACTTT
GTCCATAGTCACCAGCTGCAGGTCAACCTACCACGGTTGCTGCGGTTTGG
TGAGCGGAATGTCCAGGATTGGCTGCTGCACGTGGTCGGCTACTTTATGC
CAGCCAGCGAAAGCGAGGGTCGCAAAAAGAAGGATGACAAAAAGTATCTG
GGACCCTTCATTGCCGCCGTTCTGTTAAAGACCGCTATTCTAAAGATGGC
ATACCACTCCATTGCCATTGTAGCGGGAAAGGCGCTTATTGTGGGCAAGA
TTGCGCTGATCATCAGTGCTATAATCGGTCTGAAAAAACTTGTGGGTCAC
GACGGCGGCGAGAAGACCACCTACGAGATCGTCAAGCATCCGCAGGTGCA
GCAGAGCCACACATACTCGTCCAGCCACCAGGGTGAGTACGATACGGGTG
GCCATGACGGAGGATCCTACCACCGCAGCATCGACGACGAGATGATGATG
CAGGACAAGGCTTACCAGGCCTGGATGCCCCACGTGGCCGCATCCCCTTC
GCCCGTCGCCAAGGGATCCCGAGCAAGCTTTCTAGACCAT

BO27946.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:51:03
Subject Length Description Subject Range Query Range Score Percent Strand
Osi11-RA 909 CG15596-PA 1..906 17..922 4530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
Osi11-RA 1167 CG15596-RA 70..975 17..922 4530 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6267783..6268688 922..17 4530 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:51:02 has no hits.

BO27946.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-23 13:00:10 Download gff for BO27946.complete
Subject Subject Range Query Range Percent Splice Strand
Osi11-RA 1..906 17..924 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:33 Download gff for BO27946.complete
Subject Subject Range Query Range Percent Splice Strand
Osi11-RA 70..975 17..924 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:33 Download gff for BO27946.complete
Subject Subject Range Query Range Percent Splice Strand
Osi11-RA 70..975 17..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:33 Download gff for BO27946.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6267781..6268688 17..924 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:33 Download gff for BO27946.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2093503..2094410 17..924 99   Minus

BO27946.pep Sequence

Translation from 16 to 940

> BO27946.pep
MESRLGLLIALLLAAFQAWAMEAPSNYNQNSTESGLLRTVRHIYGQCAYS
EDVFWCCKIQGVRLLGRALKVPQLGIVDGVSLVRRESFTQDTRSGRSSLL
ESQLSNRDLEHLSGKSLDALLLERFLNFVHSHQLQVNLPRLLRFGERNVQ
DWLLHVVGYFMPASESEGRKKKDDKKYLGPFIAAVLLKTAILKMAYHSIA
IVAGKALIVGKIALIISAIIGLKKLVGHDGGEKTTYEIVKHPQVQQSHTY
SSSHQGEYDTGGHDGGSYHRSIDDEMMMQDKAYQAWMPHVAASPSPVAKG
SRASFLDH

BO27946.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:35:36
Subject Length Description Subject Range Query Range Score Percent Strand
Osi11-PA 302 CG15596-PA 1..302 1..302 1554 100 Plus
Osi7-PA 288 CG1153-PA 43..285 43..288 256 33.3 Plus
Osi8-PA 274 CG15591-PA 44..262 26..288 228 28.1 Plus
Osi9-PA 233 CG15592-PA 61..215 76..253 220 34.1 Plus
Osi16-PA 278 CG31561-PA 54..256 47..267 203 30.9 Plus