BO27952.complete Sequence
1060 bp assembled on 2011-06-17
GenBank Submission: KX796120
> BO27952.complete
GAAGTTATCAGTCGACATGGTCACACATGGTGTCCTCGGCTTGGGATTTC
TCATTGTTGGTCTAATTCTGGCCACGGACGCCTGGCTGTTATCCGAATCT
GGTTTAAACGAATCCAGCTACAAAGTCCGTCATCTATCGATGCACTTTTC
GCGAGTGTTTCTCAGCGTAAATGTAGAAAGCAACGATGCGCCCACTTTGA
TCGAGGCGCAATGGCCGGTTTCCTATTTTCCCATGCCCACTGTCGTCTTT
CCCCACATCGATGTTCATTCCATGGGGGATCATGATGATTGCTCTCTGGT
ACAACAGGCACACTGGTCCCAGGTGGATGCACTGAGTCGACTGTGGGTCA
TGGACATCGGATTTCCCGGCAGCACGTGCTCACCCCGTTTGTTTGTCTTC
GATCTGATGCGTAACAACGCGGAGCTATTGAGAATCGATTGTGGACACCA
TATAGGTGCTAATGACACCCACTTTCTGACTGTCCAAATGGGACCCAAGA
GTCCGGGATGCGAGCACGAGCGCCATATTTACTTCATCCTTGGAAAGGTA
CCAGAAATTCTAGCCTACGACATCCTGGAGCAGACGTGGCACCGCCTATC
CTTGGAGAGCAATAAGTACGAGAATATGAATCAATCGTTTCCCATCAAGC
CAGTGGATTTCATCTTCGGAATTCAAGGGGAACTCATACTCTCCGACCAG
GATGGTGATCTATACAGTACGGTGGACAGACTGGAAATTGAAGGCAAAAG
CGAATTAGCAAGCAAACCAATTAACAATAGCATTAAACTCACACATTTGG
GCAGTCTTCTGGGCAGCAGTCGCAGCATGATCATCGACAATTTCGGAACA
TTGTACTATGTTATCCCCAAATTCGGAGCTGTCGTACGATGTGCCAAACT
AGCCAACATCACAGCCGAGGGCAACGAAATCATATATATCACATCGAAGA
ACATTCAGCAGATTTTCTTCACCTCCAATGATGCATTATGGGTCCTAAGT
GATCGGGTCTTGAATGCGAAGGACATGTGCTTTCCTAGCTTAGCAAGCTT
TCTAGACCAT
BO27952.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:49:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
yellow-k-RA | 1029 | CG7463-PA | 1..1026 | 17..1042 | 5130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:49:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
yellow-k-RA | 1034 | CG7463-RA | 1..1026 | 17..1042 | 5130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:49:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15520620..15521645 | 17..1042 | 5130 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 14:49:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\BuT5 | 669 | Dbuz\BuT5 BUT5 669bp | 563..617 | 675..621 | 113 | 67.3 | Minus |
BO27952.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:32 Download gff for
BO27952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
yellow-k-RA | 1..1026 | 17..1044 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:25 Download gff for
BO27952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
yellow-k-RA | 1..1026 | 17..1044 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:53 Download gff for
BO27952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
yellow-k-RA | 1..1026 | 17..1044 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:53 Download gff for
BO27952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15520620..15521645 | 17..1044 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:25 Download gff for
BO27952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15513720..15514745 | 17..1044 | 99 | | Plus |
BO27952.pep Sequence
Translation from 16 to 1060
> BO27952.pep
MVTHGVLGLGFLIVGLILATDAWLLSESGLNESSYKVRHLSMHFSRVFLS
VNVESNDAPTLIEAQWPVSYFPMPTVVFPHIDVHSMGDHDDCSLVQQAHW
SQVDALSRLWVMDIGFPGSTCSPRLFVFDLMRNNAELLRIDCGHHIGAND
THFLTVQMGPKSPGCEHERHIYFILGKVPEILAYDILEQTWHRLSLESNK
YENMNQSFPIKPVDFIFGIQGELILSDQDGDLYSTVDRLEIEGKSELASK
PINNSIKLTHLGSLLGSSRSMIIDNFGTLYYVIPKFGAVVRCAKLANITA
EGNEIIYITSKNIQQIFFTSNDALWVLSDRVLNAKDMCFPSLASFLDH
BO27952.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:27:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
yellow-k-PA | 342 | CG7463-PA | 1..342 | 1..342 | 1800 | 100 | Plus |