BO27953.complete Sequence
481 bp assembled on 2011-06-17
GenBank Submission: KX796327
> BO27953.complete
GAAGTTATCAGTCGACATGTCGGCCATCAGCAAGCAGAAGACCCTCAACA
CCATGTACAAATCGAAAGTCTCGCCTTCGCGTCGCCTGAAGAATCTGCTG
AAGCCGCTGCTCGGTCAATTCTTCAACATGAAGAAGGAGCAGCCCAAGAG
GAGCTCCTACATCGCCTCCGAGGAGAAGGAGGCCGAGTTCGAGTGGCTCA
GCAACGATATGGACAACATGGCCAACGAGCATCTGGAGCATCGCCTCATC
GAGGAAATCCGCCAGTGCGCCAAGGAAGATGCCGTCATCGTTTACAATGA
GAACGGATCCGGGGAGCTGCACACCATCGACCAGGAGGATTACTATGTAC
CAGTGCATTTTGCCCGCACCAATGCCGGCACCTTCTTCTGGACATCGGTG
CAACCCAAAGCCTGCGAACCCTATGCCATCGAATGGAACTTCCTGGACCG
TTGGGCTCAAGCTGCAAGCTTTCTAGACCAT
BO27953.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:49:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ocho-RB | 450 | CG3396-PB | 1..447 | 17..463 | 2235 | 100 | Plus |
| Ocho-RC | 450 | CG3396-PC | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:49:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ocho-RB | 1193 | CG3396-RB | 457..903 | 17..463 | 2235 | 100 | Plus |
| Ocho-RC | 858 | CG3396-RC | 122..568 | 17..463 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:49:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14975304..14975750 | 17..463 | 2235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:49:32 has no hits.
BO27953.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:33 Download gff for
BO27953.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ocho-RB | 457..903 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:27 Download gff for
BO27953.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ocho-RC | 122..568 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:56 Download gff for
BO27953.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ocho-RC | 122..568 | 17..465 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:56 Download gff for
BO27953.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14975304..14975750 | 17..465 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:27 Download gff for
BO27953.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14968404..14968850 | 17..465 | 99 | | Plus |
BO27953.pep Sequence
Translation from 16 to 481
> BO27953.pep
MSAISKQKTLNTMYKSKVSPSRRLKNLLKPLLGQFFNMKKEQPKRSSYIA
SEEKEAEFEWLSNDMDNMANEHLEHRLIEEIRQCAKEDAVIVYNENGSGE
LHTIDQEDYYVPVHFARTNAGTFFWTSVQPKACEPYAIEWNFLDRWAQAA
SFLDH
BO27953.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ocho-PB | 149 | CG3396-PB | 1..149 | 1..149 | 793 | 100 | Plus |
| Ocho-PC | 149 | CG3396-PC | 1..149 | 1..149 | 793 | 100 | Plus |
| Tom-PA | 158 | CG5185-PA | 28..158 | 22..149 | 180 | 37 | Plus |
| E(spl)malpha-BFM-PA | 138 | CG8337-PA | 10..138 | 11..149 | 161 | 36.5 | Plus |
