BO27955.complete Sequence
823 bp assembled on 2011-06-17
GenBank Submission: KX799133
> BO27955.complete
GAAGTTATCAGTCGACATGCTAAAATCCGCAAGTGCTTTGCTATGTGGTC
TTCTTGCTTTAAATTTGTATGGAGCTTGGGCAGAATCCGATGTGATTTGT
CCTTTAAAGGACCCTCCTAGTCAATGTGGAGGATTCTGTCTGGGTGTACT
TACGCCCGTGTTAAATCACCTGACCATTTCCCAAAATCTGGCGAATTCCA
ATAATTCAAGCAAGGCTAACGAGGTCCTGGTGAGACAGTACACGATGGAA
GGCCAACTGACTGCTCTGCAGAATAAGCAACTAAGCATTGAAGTCGCACT
GGATGCCCAAGGCAGAAAACTGAATGTTAACGAACAGAACTTTACTGAAC
GACTGAATTGCATGGAAGGCATACTGTCGGCCCTGGAGAAAACAGTCCTT
GAAGTAAAAACCAAAATAAAATACCTCGGATTCGAGCAAATCGGCTCAAA
GTACTATTACATAGAGAAAGTATCCGAGAAGAACTGGTCCACTGCTTCAA
AAACTTGTCGCAATATGGGAGGGCACCTGGCCGACATTAAGGACGAGGCA
GATCTAGCCGCCATCAAGGCGAATCTCAAGGAGGACACGCATTACTGGCT
GGGAATCAATGACTTGGACCACGAGGGAAAATTCTTGTCCATGCCCACGG
GCAAGCAGACTACCTTTTTGAAATGGGCCTCGGGGAGACCCTCTCAGTTG
GACACCCTCAACTGCGTGTTCCTATACAACGGGGAAATGTACGATTACCC
ATGCCACTATACTTTCCGGTTCATTTGCCAGACCGAGGAGGAAGATTTAA
ATGTAGCAAGCTTTCTAGACCAT
BO27955.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:49:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-22C-RB | 792 | CG42295-PB | 1..789 | 17..805 | 3945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:49:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-22C-RB | 857 | CG42295-RB | 19..807 | 17..805 | 3945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:49:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2036459..2037247 | 805..17 | 3945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:49:48 has no hits.
BO27955.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:34 Download gff for
BO27955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-22C-RB | 1..789 | 17..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:33 Download gff for
BO27955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-22C-RB | 19..807 | 17..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:03 Download gff for
BO27955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-22C-RB | 19..807 | 17..807 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:03 Download gff for
BO27955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2036456..2037247 | 17..807 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:33 Download gff for
BO27955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2036456..2037247 | 17..807 | 99 | | Minus |
BO27955.pep Sequence
Translation from 16 to 823
> BO27955.pep
MLKSASALLCGLLALNLYGAWAESDVICPLKDPPSQCGGFCLGVLTPVLN
HLTISQNLANSNNSSKANEVLVRQYTMEGQLTALQNKQLSIEVALDAQGR
KLNVNEQNFTERLNCMEGILSALEKTVLEVKTKIKYLGFEQIGSKYYYIE
KVSEKNWSTASKTCRNMGGHLADIKDEADLAAIKANLKEDTHYWLGINDL
DHEGKFLSMPTGKQTTFLKWASGRPSQLDTLNCVFLYNGEMYDYPCHYTF
RFICQTEEEDLNVASFLDH
BO27955.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:28:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-22C-PB | 263 | CG42295-PB | 1..263 | 1..263 | 1389 | 100 | Plus |
| CG15358-PC | 229 | CG15358-PC | 4..229 | 27..262 | 378 | 35 | Plus |
| CG15358-PB | 229 | CG15358-PB | 4..229 | 27..262 | 378 | 35 | Plus |
| lectin-28C-PC | 265 | CG7106-PC | 30..263 | 26..258 | 361 | 34.3 | Plus |
| lectin-28C-PB | 265 | CG7106-PB | 30..263 | 26..258 | 361 | 34.3 | Plus |
