Clone BO27957 Report

Search the DGRC for BO27957

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:279
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptTwdlZ-RB
Protein status:BO27957.pep: Imported from assembly
Sequenced Size:664

Clone Sequence Records

BO27957.complete Sequence

664 bp assembled on 2011-06-17

GenBank Submission: KX798181

> BO27957.complete
GAAGTTATCAGTCGACATGTTGAACATATTTGTGTGGTTATCACTTTCGT
TGATTAGTCTGTCCTGGGCACAAGGATCGCGTTATTTACCACCACCGAAT
CCGGCCATGGAACCCATCATAACCAAGCAGTTTTACAGCATATCACCCGC
CGAAGATCCTGAGGATCTGGAGCCAAGAACGAAACACTTGGTGATCGGAC
AGCCACGCAGGAATTACCGAGTGATTTTCATCCGCGCTCCAACGGGAAAC
AGCGAGCATGTGAAATATACGGCGGAGTTGGCACCTCAGGAGGAGCGAAC
TGTGATCTATGTGCTGACCCGGAAGCAACAGGAATTGGAGGCCGCCGATA
TTATGGCACCGCAGCAGAAGTCTCAAGTCGAACAGAAGCCGGATGTATTC
TTCATCAAGTACAAAACCAACGATGAGGCAGCGGCTGCCCAAAGGGAAAT
CCAAACGCAATACGATCAACTTGGTGGAAATACGGAAATCGCAGCGCCCT
ATGTGGCGCCCATTAAATCGGTGATTGGAGCACTTAGTAGCCCCCAATAT
CCAGCAGCTCCATATCCAGTTCAAAGACAATCTCCTGGCTATCACTATGA
TAGGCCCGATAGGTCCACAATCTTGGCGCCAGTGGAACGAACTAACGCAA
GCTTTCTAGACCAT

BO27957.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:50:05
Subject Length Description Subject Range Query Range Score Percent Strand
TwdlZ-RB 633 CG32569-PB 1..630 17..646 3150 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:06
Subject Length Description Subject Range Query Range Score Percent Strand
TwdlZ-RB 691 CG32569-RB 1..630 17..646 3150 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16738178..16738807 17..646 3150 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:50:04 has no hits.

BO27957.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:35 Download gff for BO27957.complete
Subject Subject Range Query Range Percent Splice Strand
TwdlZ-RB 6..630 22..648 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:40 Download gff for BO27957.complete
Subject Subject Range Query Range Percent Splice Strand
TwdlZ-RB 6..630 22..648 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:07 Download gff for BO27957.complete
Subject Subject Range Query Range Percent Splice Strand
TwdlZ-RB 6..630 22..648 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:07 Download gff for BO27957.complete
Subject Subject Range Query Range Percent Splice Strand
X 16738183..16738807 22..648 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:40 Download gff for BO27957.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16632216..16632840 22..648 99   Plus

BO27957.pep Sequence

Translation from 16 to 664

> BO27957.pep
MLNIFVWLSLSLISLSWAQGSRYLPPPNPAMEPIITKQFYSISPAEDPED
LEPRTKHLVIGQPRRNYRVIFIRAPTGNSEHVKYTAELAPQEERTVIYVL
TRKQQELEAADIMAPQQKSQVEQKPDVFFIKYKTNDEAAAAQREIQTQYD
QLGGNTEIAAPYVAPIKSVIGALSSPQYPAAPYPVQRQSPGYHYDRPDRS
TILAPVERTNASFLDH

BO27957.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
TwdlZ-PB 210 CG32569-PB 1..210 1..210 1090 100 Plus
TwdlY-PA 247 CG32570-PA 63..213 20..173 425 53.9 Plus
Twdlalpha-PA 388 CG32574-PA 170..316 32..181 374 51.3 Plus
TwdlG-PC 278 CG14643-PC 107..252 29..175 317 46.4 Plus
TwdlG-PB 278 CG14643-PB 107..252 29..175 317 46.4 Plus