Clone BO27958 Report

Search the DGRC for BO27958

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:279
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptIlp1-RA
Protein status:BO27958.pep: Imported from assembly
Sequenced Size:496

Clone Sequence Records

BO27958.complete Sequence

496 bp assembled on 2011-06-29

GenBank Submission: KX795298

> BO27958.complete
GAAGTTATCAGTCGACATGTTTAGCCAGCACAACGGTGCAGCAGTACATG
GCCTTCGGCTCCAGTCGCTGCTCATCGCAGCCATGCTCACCGCTGCAATG
GCAATGGTCACGCCGACTGGCAGTGGTCACCAGTTGCTGCCCCCCGGAAA
CCACAAACTCTGCGGCCCCGCACTGTCCGATGCCATGGATGTGGTGTGTC
CCCATGGCTTTAATACGCTGCCAAGGAAACGTGAAAGCTTGCTGGGCAAC
AGCGACGACGACGAGGACACGGAGCAGGAGGTGCAGGATGATAGCAGCAT
GTGGCAGACACTGGACGGGGCAGGATACTCTTTTAGTCCACTGCTAACCA
ATCTGTACGGATCCGAGGTCCTGATCAAGATGCGTCGCCACAGGAGACAC
CTGACCGGTGGCGTCTACGACGAGTGCTGCGTCAAGACCTGCAGCTACTT
GGAGTTAGCCATCTACTGTCTACCGAAAGCAAGCTTTCTAGACCAT

BO27958.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:31:11
Subject Length Description Subject Range Query Range Score Percent Strand
Ilp1-RA 465 CG14173-PA 1..462 17..478 2310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
Ilp1-RA 465 CG14173-RA 1..462 17..478 2310 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:31:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9798434..9798895 17..478 2310 100 Plus
2L 23513712 2L 23338273..23338510 17..254 1070 96.6 Plus
Blast to na_te.dros performed on 2014-11-26 16:31:10 has no hits.

BO27958.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-29 12:27:09 Download gff for BO27958.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp1-RA 7..462 23..480 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:02:56 Download gff for BO27958.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp1-RA 7..462 23..480 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:21:05 Download gff for BO27958.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp1-RA 7..462 23..480 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:21:05 Download gff for BO27958.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9798440..9798895 23..480 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:02:56 Download gff for BO27958.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9791540..9791995 23..480 99   Plus

BO27958.pep Sequence

Translation from 16 to 496

> BO27958.pep
MFSQHNGAAVHGLRLQSLLIAAMLTAAMAMVTPTGSGHQLLPPGNHKLCG
PALSDAMDVVCPHGFNTLPRKRESLLGNSDDDEDTEQEVQDDSSMWQTLD
GAGYSFSPLLTNLYGSEVLIKMRRHRRHLTGGVYDECCVKTCSYLELAIY
CLPKASFLDH

BO27958.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:54:34
Subject Length Description Subject Range Query Range Score Percent Strand
Ilp1-PA 154 CG14173-PA 1..154 1..154 823 100 Plus