BO27962.complete Sequence
1246 bp assembled on 2011-06-17
GenBank Submission: KX794786
> BO27962.complete
GAAGTTATCAGTCGACATGGACTTCACCAGCGACTACGCGCATCGGCGTA
TGGTGAAATTTCTGACGATCATACTGATAGGCTTTATGACCGTCTTCGGA
CTCCTGGCCAATCGATATCGGGCGGGCCGTCGTGAAAGATTCCGCTTCTC
AAAGGCAAATCTGGCCTTTGCTTCGCTGTGGGCAATTGCATTCAGCTTGG
TTTACGGGCGGCAAATCTACAAGGAGTACCAGGAGGGTCAGATCAACCTG
AAGGACGCCACCACTCTGTACAGCTATATGAACATTACGGTGGCTGTTAT
TAACTATGTGTCGCAAATGATAATCAGTGACCATGTGGCCAAGGTGTTGA
GCAAAGTGCCCTTCTTTGATACCCTAAAAGAATTCCGTCTGGACAGCAGG
TCGCTGTACATATCCATCGTTTTGGCTCTGGTCAAGACCGTGGCTTTTCC
TCTAACAATTGAAGTGGCTTTCATACTGCAACAGAGGCGGCAGCATCCCG
AGATGAGCTTGATCTGGACCTTGTACCGGCTGTTTCCCTTAATTATTTCG
AATTTTCTCAATAACTGCTACTTTGGCGCAATGGTGGTGGTGAAGGAGAT
TCTGTACGCTCTGAACAGACGGCTGGAAGCGCAGCTGCAGGAGGTGAATC
TGCTGCAGAGGAAGGACCAGCTAAAGTTGTACACTAAATACTACCGCATG
CAGCGATTTTGCGCCTTGGCGGATGAACTCGACCAGCTGGCGTATCGCTA
TAGGTTGATATATGTGCATTCGGGAAAGTATCTGACCCCAATGTCCTTGT
CCATGATTCTGTCGCTCATATGCCACCTGCTCGGAATAACGGTGGGTTTC
TACAGTCTGTACTATGCCATAGCGGACACCTTAATCATGGGCAAGCCGTA
CGATGGTCTTGGATCGCTGATCAATCTGGTTTTCCTCTCCATCTCGCTGG
CGGAGATCACATTGCTCACGCATTTGTGCAACCACCTATTGGTGGCCACC
CGAAGATCGGCAGTCATTCTCCAGGAGATGAATCTCCAGCATGCGGACAG
CCGCTACCGTCAGGCAGTCCACGGCTTTACTCTGCTGGTCACGGTGACCA
AGTACCAAATTAAACCCTTGGGCTTGTACGAGCTGGACATGCGACTGATC
AGCAATGTCTTCTCGGCGGTGGCCAGCTTCCTGCTGATCCTCGTGCAGGC
CGATCTGTCCCAGCGCTTCAAGATGCAAGCAAGCTTTCTAGACCAT
BO27962.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:50:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr94a-RA | 1215 | CG31280-PA | 1..1212 | 17..1228 | 6060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr94a-RA | 1215 | CG31280-RA | 1..1212 | 17..1228 | 6060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23051689..23052900 | 17..1228 | 6060 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:50:39 has no hits.
BO27962.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:37 Download gff for
BO27962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr94a-RA | 1..1212 | 17..1230 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:53 Download gff for
BO27962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr94a-RA | 1..1212 | 17..1230 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:17 Download gff for
BO27962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr94a-RA | 1..1212 | 17..1230 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:17 Download gff for
BO27962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23051689..23052900 | 17..1230 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:53 Download gff for
BO27962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18877411..18878622 | 17..1230 | 99 | | Plus |
BO27962.pep Sequence
Translation from 16 to 1246
> BO27962.pep
MDFTSDYAHRRMVKFLTIILIGFMTVFGLLANRYRAGRRERFRFSKANLA
FASLWAIAFSLVYGRQIYKEYQEGQINLKDATTLYSYMNITVAVINYVSQ
MIISDHVAKVLSKVPFFDTLKEFRLDSRSLYISIVLALVKTVAFPLTIEV
AFILQQRRQHPEMSLIWTLYRLFPLIISNFLNNCYFGAMVVVKEILYALN
RRLEAQLQEVNLLQRKDQLKLYTKYYRMQRFCALADELDQLAYRYRLIYV
HSGKYLTPMSLSMILSLICHLLGITVGFYSLYYAIADTLIMGKPYDGLGS
LINLVFLSISLAEITLLTHLCNHLLVATRRSAVILQEMNLQHADSRYRQA
VHGFTLLVTVTKYQIKPLGLYELDMRLISNVFSAVASFLLILVQADLSQR
FKMQASFLDH
BO27962.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:28:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr94a-PA | 404 | CG31280-PA | 1..404 | 1..404 | 2026 | 100 | Plus |
| Gr97a-PB | 425 | CG33083-PB | 29..425 | 9..404 | 699 | 37.4 | Plus |
| Gr97a-PA | 423 | CG33083-PA | 29..423 | 9..404 | 683 | 37.2 | Plus |
| Gr93a-PA | 419 | CG13417-PA | 67..409 | 49..402 | 180 | 21.8 | Plus |
