BO27963.complete Sequence
1378 bp assembled on 2011-06-17
GenBank Submission: KX796974
> BO27963.complete
GAAGTTATCAGTCGACATGGGCAAGAAAAAGGTGCCCGTTGAGGACCTGG
TGGTTCCACCGCAGGACACGCGAATATGCGGCACCATATGCATCTGCCAG
ATGACCCTGGTGCTCAGCTCGGTGGCTCTCGTCTACCTCACGGTGGCCAT
ATATATGCCCTCAACCAGGGCCTTCAAAAGTGGCATCGATCCCACGCCGG
TGATGTGCACCACCACGCGGGCGGTGAACAAGGACAACTGCGAGTGGGGC
AGTTGTGGCGAGTGGTGTCTGAGCAAGACTTCCGGAGCCTGCATCCAGAT
CTATGTGAATCTGCGCAGCAATGGCAGCAATCTCATATTCCAGAACTGCA
CCAACTCGGCCAATAAAACGTGCTACGGGATCGACCAGGATCGCGCGGAC
AAGGCCAGGTGCATCAATGATGAGTGCAAGAATCTCACGGGCACCTTCAA
TTGCACCGCTGGCCAGTGTCTGAACATCACGGATGCCTTCGAGTGCATCT
TCCACAACAGTGATGCACCAGTCAAGTGTTCCGGCAGGCGGGGAAAGATC
AACTGCATGGACATCAGCGGGCTGTACTCCTGCAGTCGAGGAACGTGCCG
GAAGATCCGTACTCCCTATAACTGTGACCGAAGGTGCGTGGACATCCCAA
CACGGAACAAGAACGTGGTGGTCCTCAGCGGGGACAAGGTCTACCTGTCG
CAGTGCCAGAATGCCATCAATGCCGAAACTCTGGAGGAGGTGTGGAACGA
GTCAAGCGAAAATGTAGCAATGACATCGTGTTACTTCATCAGGCACACCT
CGGACCAGGTGGATGCGGTGGACTGCATCAATGGCTCCACGCTGGAGACC
AATATGCTCAGCGATCTGACCAACTTCACATATCTGAGCCACCTGCACGT
GTCGGTGGCCACTCCAGTGCCGGAAATAGCACCACCCGATGTGGACCTCA
CCATTTCCAACGAGTCCAAGCTGATGATCAATCTGGAGGGGTGTGTGAAC
ACTCTGATGGACGAGTGCAAGGAGTTCCTCAAGGACTTCGGACGCGATGG
CAGCGACCACAATGCCCGGGCCCGCTTCCCGTGCTTCTATTCGCCCGGAA
AGAAGGACGTGGTGGTGGCCCGATTCGACCTGGAGGTCACCTATCGCCAG
TTTGTGTTCGCCTCGGTAGTGCCATCGGTTCTGTTCGTGGTCTCGTGTTC
CATCCTGATCATGTGCCAGACCACCGTCTACGTGGGCGACGATGCCAAGA
TGCGCTTCAAAGGATGTGTGGACACGGAGACGGTCCTGAATAAGAACAAC
GTGGGCGCACCCACCAACGGCGACATGGGCGGGGGCGGCGGCGATGAGGT
TATGGCCCTAGCAAGCTTTCTAGACCAT
BO27963.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:50:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Teh3-RA | 1347 | CG18676-PA | 1..1344 | 17..1360 | 6720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Teh3-RA | 1586 | CG18676-RA | 1..1344 | 17..1360 | 6720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4183320..4184663 | 1360..17 | 6720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:50:44 has no hits.
BO27963.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:38 Download gff for
BO27963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Teh3-RA | 1..1344 | 17..1362 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:55 Download gff for
BO27963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Teh3-RA | 1..1344 | 17..1362 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:19 Download gff for
BO27963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Teh3-RA | 1..1344 | 17..1362 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:19 Download gff for
BO27963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4183317..4184663 | 17..1362 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:55 Download gff for
BO27963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4183317..4184663 | 17..1362 | 99 | | Minus |
BO27963.pep Sequence
Translation from 16 to 1378
> BO27963.pep
MGKKKVPVEDLVVPPQDTRICGTICICQMTLVLSSVALVYLTVAIYMPST
RAFKSGIDPTPVMCTTTRAVNKDNCEWGSCGEWCLSKTSGACIQIYVNLR
SNGSNLIFQNCTNSANKTCYGIDQDRADKARCINDECKNLTGTFNCTAGQ
CLNITDAFECIFHNSDAPVKCSGRRGKINCMDISGLYSCSRGTCRKIRTP
YNCDRRCVDIPTRNKNVVVLSGDKVYLSQCQNAINAETLEEVWNESSENV
AMTSCYFIRHTSDQVDAVDCINGSTLETNMLSDLTNFTYLSHLHVSVATP
VPEIAPPDVDLTISNESKLMINLEGCVNTLMDECKEFLKDFGRDGSDHNA
RARFPCFYSPGKKDVVVARFDLEVTYRQFVFASVVPSVLFVVSCSILIMC
QTTVYVGDDAKMRFKGCVDTETVLNKNNVGAPTNGDMGGGGGDEVMALAS
FLDH
BO27963.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:28:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Teh3-PA | 448 | CG18676-PA | 1..448 | 1..448 | 2407 | 100 | Plus |
Teh4-PB | 524 | CG15003-PB | 1..423 | 1..413 | 820 | 39.5 | Plus |