BO27965.complete Sequence
685 bp assembled on 2011-06-17
GenBank Submission: KX799783
> BO27965.complete
GAAGTTATCAGTCGACATGTACTTCCTTAATCTTTGCCTGATTTGTACCA
CCATCGGTTTGGCCGTCGGTTCACCAACCTTGGAGTACGGTCCCCCACCA
ACTTCGGATACGATCAGTCAGTATCACCACCAGGATGAGCATGGCCAGTA
CGCCTATGGTTACATGGCACCACTGTATTCCAAGCACGAGACCCGCACCG
TGGATGGTGTGATCCGGGGTACCTTCTCCCACATCGATGCAAATGGCGAA
ACCCAGACCGTGGACTATGTGGCCGATGCCGAGGGCTTCCATGTAACCTC
CAATCTGCCCAATCAGCAGGCCAATCAGGAAACCCCTGAAGTGGCTGCAC
TGCGAACACAGCATCTGGAGGCCCATAACCAGGCCAAATTGAGGTTGGCC
GGAGACTACTCCGTGGGTCCACAGCCTGTTCGGGACACTCCCGAGGTGGC
CGCCGCTAAGGTTGCATTCTTCAAGCGTTTCGAAGCCGAGAAGCTGCGCA
ACAAGTTGCTCGCCGAGAAGAAAGTTCTGGTGATACCGAATCCAACTCCC
ATCGCTGTTCGTTCACAGCCGATATATGTCTACCAGCCCACCACCACAGG
ATTCGTGTACAACTACCACACCAAGACGCAGGCCCAAGTTCCATCGAGGA
ACTACCTGCCAGTAGTCGCAAGCTTTCTAGACCAT
BO27965.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:50:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr72Eb-RA | 654 | CG12255-PA | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr72Eb-RA | 809 | CG12255-RA | 99..749 | 17..667 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16364997..16365647 | 17..667 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:50:53 has no hits.
BO27965.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:39 Download gff for
BO27965.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr72Eb-RA | 1..651 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:59 Download gff for
BO27965.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr72Eb-RA | 99..749 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:22 Download gff for
BO27965.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr72Eb-RA | 99..749 | 17..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:22 Download gff for
BO27965.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16364997..16365647 | 17..669 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:59 Download gff for
BO27965.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16358097..16358747 | 17..669 | 99 | | Plus |
BO27965.pep Sequence
Translation from 16 to 685
> BO27965.pep
MYFLNLCLICTTIGLAVGSPTLEYGPPPTSDTISQYHHQDEHGQYAYGYM
APLYSKHETRTVDGVIRGTFSHIDANGETQTVDYVADAEGFHVTSNLPNQ
QANQETPEVAALRTQHLEAHNQAKLRLAGDYSVGPQPVRDTPEVAAAKVA
FFKRFEAEKLRNKLLAEKKVLVIPNPTPIAVRSQPIYVYQPTTTGFVYNY
HTKTQAQVPSRNYLPVVASFLDH
BO27965.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:28:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr72Eb-PA | 217 | CG12255-PA | 1..217 | 1..217 | 1147 | 100 | Plus |
Cpr72Ea-PA | 341 | CG4818-PA | 36..147 | 32..138 | 216 | 43.8 | Plus |
Cpr92F-PA | 381 | CG5494-PA | 25..143 | 34..150 | 167 | 39 | Plus |