BO27966.complete Sequence
881 bp assembled on 2011-06-29
> BO27966.complete
GAAGTTATCAGTCGACATGTTTAGATTGTCAGTCTTAGTTCTGAACTTAC
TCCTTGTTAGCCATGAATTCTCGGCAGGAACCGCGAAAATTGAAATTCAG
CCATTACCTGCCCTATGCAACGGATACTGCTTCCCCACCCTGAAGCCAGT
TATGGAGTATGTTGCTATCCACCAGGACAAATGGAATACTTGTACGGAAA
TATTAGCGAACGAAGCCCGCAAGGATCAGATCCAGTTGAATATCCAGCTG
GATGCCTTGAAAGCAGACGTTTCCAACATAAAGGCATCGCAGCTGTCAAA
GGATGAGAAGCTGGACAGGATGGAGCGAGAGCAGTTTGCCATGCATGAAT
CTTTGGAGACCATCAATCGGTATCTTACAGTGAAACTGGACAGAACGAAA
TTGCAGCTTGAGGCGATCAAAAACACAATGGATTATATGAAGGCCCAAAT
GGATGGCTATTTCTCAGCCATAAATGGAGTTCAATGCCTACAGCCAGGAT
TTGAGAAGATAGGCGATAGATATTTTTACATCGAAGAAGATGTTGAGCTA
AATTGGCTGGATGCTCAGGCCAAATGTCGTCGAATGGGAGGTCACCTAGC
CTCTATAAAAACTAAACAGGAGTTTGACGCAATCGTAGAGAAGCTCGATG
ATTCGAAATCATACTTCCTGGGCGTCAACGAAAACACAAAAACCGGTGAC
TTTGTGTCTGCAGCCTCCGGAAAAAGTTGTTTGTATCACGAGTGGGGTCC
TGGTGAACCCCATCACAATAATGACCAAGAGCGATGCGTTTCAATCTTGC
GAAAACTCATGCATGTGGGCAATTGTACTTATGAAAAAAGATTCATATGC
CAGTATGGCATCGCCAAGCTTTCTAGACCAT
BO27966.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-24A-RA | 849 | CG3410-PA | 1..846 | 17..862 | 4230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-24A-RA | 974 | CG3410-RA | 45..891 | 16..862 | 4235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3716883..3717729 | 862..16 | 4235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:30:23 has no hits.
BO27966.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-29 12:12:48 Download gff for
BO27966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24A-RA | 52..896 | 23..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:02:38 Download gff for
BO27966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24A-RA | 52..896 | 23..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:44 Download gff for
BO27966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24A-RA | 52..896 | 23..865 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:44 Download gff for
BO27966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3716878..3717722 | 23..865 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:02:38 Download gff for
BO27966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3716878..3717722 | 23..865 | 99 | | Minus |
BO27966.pep Sequence
Translation from 16 to 880
> BO27966.pep
MFRLSVLVLNLLLVSHEFSAGTAKIEIQPLPALCNGYCFPTLKPVMEYVA
IHQDKWNTCTEILANEARKDQIQLNIQLDALKADVSNIKASQLSKDEKLD
RMEREQFAMHESLETINRYLTVKLDRTKLQLEAIKNTMDYMKAQMDGYFS
AINGVQCLQPGFEKIGDRYFYIEEDVELNWLDAQAKCRRMGGHLASIKTK
QEFDAIVEKLDDSKSYFLGVNENTKTGDFVSAASGKSCLYHEWGPGEPHH
NNDQERCVSILRKLMHVGNCTYEKRFICQYGIAKLSRP
BO27966.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:53:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-24A-PA | 282 | CG3410-PA | 1..282 | 1..282 | 1488 | 100 | Plus |
| lectin-24Db-PA | 359 | CG2958-PA | 1..354 | 1..279 | 357 | 29.8 | Plus |
| CG15818-PA | 283 | CG15818-PA | 38..278 | 31..279 | 343 | 32.6 | Plus |
| lectin-28C-PC | 265 | CG7106-PC | 41..260 | 34..279 | 327 | 28.9 | Plus |
| lectin-28C-PB | 265 | CG7106-PB | 41..260 | 34..279 | 327 | 28.9 | Plus |
