BO27967.complete Sequence
511 bp assembled on 2011-06-17
GenBank Submission: KX799403
> BO27967.complete
GAAGTTATCAGTCGACATGAAAGTTATTATTTTGCTGGCTCTCTTCAGCC
AGATTATCCTGGAAATTGTTGCCTATGAGCATAAAATCGCTCACAGGAAA
TGTGGCGAGAACACTTTCCCAGATTGTTATTCATATTGTAACAAAGGATG
CAAGGATAACCCAGTCGACTGCATTCATTACTGCGAGAAAGGATGTGGAT
GCATCGAAGGCTCAATAGTGAGAAACAATGGAGGATGCCGAAGAATAAAG
ATTTGCGACAAGGATGATGATTCCCTATCCGTTGAAAATAACGAGTTGGC
TGAAAAATACGTAACATCTTATTGGGAGGACCCGGTAAATAGTAATGAAA
ATGAAAATCAAGCCCAAACGTTAGATGGTTTGGATGAAAACAAATCGGGT
GAGATAAAAAGCATGGAACAGCCGAATGAAGTGCCGCCGGAGAGTCCTTC
GGAGGATGCTCCCAATGATCCCAAGCCACCAGTAGATGCAGTGGCAAGCT
TTCTAGACCAT
BO27967.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:51:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp53D-RB | 480 | CG42477-PB | 1..477 | 17..493 | 2385 | 100 | Plus |
Sfp53D-RA | 480 | CG42477-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:51:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp53D-RB | 820 | CG42477-RB | 30..506 | 17..493 | 2385 | 100 | Plus |
Sfp53D-RA | 577 | CG42477-RA | 30..506 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:51:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16744609..16745085 | 493..17 | 2385 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 14:51:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 1194..1225 | 338..369 | 106 | 81.2 | Plus |
BO27967.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:40 Download gff for
BO27967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp53D-RA | 20..496 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:04 Download gff for
BO27967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp53D-RA | 20..496 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:25 Download gff for
BO27967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp53D-RA | 30..506 | 17..495 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:25 Download gff for
BO27967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16744607..16745085 | 17..495 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:04 Download gff for
BO27967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12632112..12632590 | 17..495 | 99 | | Minus |
BO27967.pep Sequence
Translation from 16 to 511
> BO27967.pep
MKVIILLALFSQIILEIVAYEHKIAHRKCGENTFPDCYSYCNKGCKDNPV
DCIHYCEKGCGCIEGSIVRNNGGCRRIKICDKDDDSLSVENNELAEKYVT
SYWEDPVNSNENENQAQTLDGLDENKSGEIKSMEQPNEVPPESPSEDAPN
DPKPPVDAVASFLDH
BO27967.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:28:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp53D-PB | 159 | CG42477-PB | 1..159 | 1..159 | 874 | 100 | Plus |
Sfp53D-PA | 159 | CG42477-PA | 1..159 | 1..159 | 874 | 100 | Plus |