BO27969.complete Sequence
574 bp assembled on 2011-06-17
GenBank Submission: KX795718
> BO27969.complete
GAAGTTATCAGTCGACATGCGCAGTTTTTGTTGTTGTTTTTATCCGGCTG
CTGTGGCGTTGCACTGCGTATTACTGTTTTACACTTTTTTTTTACTTTTT
AGAGCGTCCGCGTTGCGGCGACGCGTTGTAAGCGGTTCGAAAGGTAGCGC
AGCACTGGCGCTCTGCCGCCAATTCGAACAGCTGAGCGCCAGCCGAAGAG
AGAGAGCCGAAGAGTGCCGAACGACGCAGCTCCGCTACCACTACCACCGC
AATGGCGCTCAGTCGCGGTCGCTGTGCGCTGCTGTGCTCTGCTGTAAGCG
CTCTTACATTCCGCGCCCGAATTTTTCGTGCTTTTCCCTTGTTTTCCCTG
TGGGCCAGCGTTTCGCTGCTGCTCGGACTCGGTTTGGGCCAACACTTGTC
GCCTCTTGGCCATTATGCAACGACAGCGAAACGAAGGTGCTCACGAAGTG
GCCAAGCTGCTCTCTGATTGGTCGGCGGTCAGTGCCACGAGGCCAGCCGA
AGTTCTCTCGCGAGAACCCAAGAGCACTCTCTCCCTCTCTTTTGGGAGAG
ATGAGAGCAAGCTTTCTAGACCAT
BO27969.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:00:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
amn-RA | 543 | CG11937-PA | 1..540 | 17..556 | 2700 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:00:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
amn-RA | 3953 | CG11937-RA | 2567..3108 | 15..556 | 2710 | 100 | Plus |
Hers-RD | 8024 | CG32529-RD | 1..140 | 156..17 | 700 | 100 | Minus |
Hers-RG | 6524 | CG32529-RG | 1..61 | 156..96 | 305 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:00:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19886953..19887494 | 556..15 | 2710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:00:26 has no hits.
BO27969.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:02 Download gff for
BO27969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
amn-RA | 2569..3108 | 17..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:46 Download gff for
BO27969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
amn-RA | 2569..3108 | 17..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:31 Download gff for
BO27969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
amn-RA | 2569..3108 | 17..558 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:31 Download gff for
BO27969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19886949..19887492 | 17..558 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:46 Download gff for
BO27969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19780982..19781525 | 17..558 | 99 | | Minus |
BO27969.pep Sequence
Translation from 16 to 574
> BO27969.pep
MRSFCCCFYPAAVALHCVLLFYTFFLLFRASALRRRVVSGSKGSAALALC
RQFEQLSASRRERAEECRTTQLRYHYHRNGAQSRSLCAAVLCCKRSYIPR
PNFSCFSLVFPVGQRFAAARTRFGPTLVASWPLCNDSETKVLTKWPSCSL
IGRRSVPRGQPKFSRENPRALSPSLLGEMRASFLDH
BO27969.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
amn-PA | 180 | CG11937-PA | 1..180 | 1..180 | 957 | 100 | Plus |