BO27970.complete Sequence
691 bp assembled on 2011-06-17
GenBank Submission: KX797199
> BO27970.complete
GAAGTTATCAGTCGACATGGATTCATCTCGCCTGATTATCTGCCTCCTAA
CTTTTCTGTTGTTTCAAACGGGAAAAGGGTTGGGGAACGGCAGTTATCTG
GAGCTCAGATTGGATGCAGCTGCTGAATCCTGTCCAGATGATTACTACTT
TAACGAAACTATCCAAGCCTGCGTATCTACAGACACTACCAGCTGTACCA
ATCACCAAATCGGCAAATGTCCGATGGCCACAGAAATGGACGAGTTTTGC
GTGTGCAAAGATAAGCACCTTCAGATCTGGAAATGCCCTGAAGGAACCTA
CTTCGATGCCAACCGATTGGTCTGCCGGGTGGGAAGCGTTGAGTGCCAGG
ACGATTATACTCCATCCCCATGTCCTAACAGCACGGCAAGCGATGTCTTC
TGCCTCTGCATCGATGGCAAATGGCATCTTAACTACTGTCCAACGGGCTT
TACCTTTGATGACGAGCTGCAGATTTGCCTGAACACAGGATCTGATGACG
ACGAGTTGCCCAGTTCGTCTGGAAAGTGCCAGCGGCTTGGATTGTTTGGT
GATCCCGCTGACTGCTCTGGGTACTATCATTGTCGCGAAAAGGGCAGTGA
TATTGAGTATTTCAGATGCTCGGTAGGAACCATCTTCAATCTAATTTCCT
TTGCGTGCGTTACTGGAACTTGTGCAAGCTTTCTAGACCAT
BO27970.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:50:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-I-RA | 660 | CG32304-PA | 1..657 | 17..673 | 3285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-I-RA | 733 | CG32304-RA | 11..669 | 15..673 | 3295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2267868..2268526 | 15..673 | 3295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:50:15 has no hits.
BO27970.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:36 Download gff for
BO27970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-I-RA | 1..657 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:43 Download gff for
BO27970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-I-RA | 1..657 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:10 Download gff for
BO27970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-I-RA | 13..669 | 17..675 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:10 Download gff for
BO27970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2267870..2268526 | 17..675 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:43 Download gff for
BO27970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2267870..2268526 | 17..675 | 99 | | Plus |
BO27970.pep Sequence
Translation from 16 to 691
> BO27970.pep
MDSSRLIICLLTFLLFQTGKGLGNGSYLELRLDAAAESCPDDYYFNETIQ
ACVSTDTTSCTNHQIGKCPMATEMDEFCVCKDKHLQIWKCPEGTYFDANR
LVCRVGSVECQDDYTPSPCPNSTASDVFCLCIDGKWHLNYCPTGFTFDDE
LQICLNTGSDDDELPSSSGKCQRLGLFGDPADCSGYYHCREKGSDIEYFR
CSVGTIFNLISFACVTGTCASFLDH
BO27970.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:28:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-I-PA | 219 | CG32304-PA | 1..219 | 1..219 | 1232 | 100 | Plus |
| CG32302-PA | 313 | CG32302-PA | 195..308 | 38..154 | 177 | 31.6 | Plus |
| CG17826-PA | 751 | CG17826-PA | 109..286 | 38..215 | 153 | 25.4 | Plus |
| CG43896-PB | 1324 | CG43896-PB | 178..382 | 33..208 | 148 | 24.5 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 178..382 | 33..208 | 148 | 24.5 | Plus |
