Clone BO27974 Report

Search the DGRC for BO27974

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:279
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptEig71Ej-RA
Protein status:BO27974.pep: Imported from assembly
Sequenced Size:328

Clone Sequence Records

BO27974.complete Sequence

328 bp assembled on 2011-06-17

GenBank Submission: KX798934

> BO27974.complete
GAAGTTATCAGTCGACATGCGGTATCTGTGCGTTTTTTCCTTAACACTTA
TCCTTTGCTGCCTTTCAATAAAGGCTCAGAGCTTAAATTGCACCAGGCTT
CGAGAAAATTGTCGTCCTTGCACCCGCCGCTTGGTGGATCCTATTAACGA
CCTGGAATTCATTAATAGCGATTGTAGGGAGAAACTTAGAGGACGTTGGA
TTTGGCGGGATGTAAGGCGTTGTGATATGCAAATTGTTGCGTGCGAAAAT
CATGAAACCCGACTGGATTGCGAGAATGTGGCTAGACTAACAGGCATGAG
ACGGATTCGTGCAAGCTTTCTAGACCAT

BO27974.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:00:49
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ej-RA 297 CG7588-PA 1..294 17..310 1470 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:00:50
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ej-RA 403 CG7588-RA 13..306 17..310 1470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:00:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15660772..15661003 248..17 1160 100 Minus
3L 28110227 3L 15660646..15660707 310..249 310 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:00:48 has no hits.

BO27974.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:03 Download gff for BO27974.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ej-RA 13..306 17..312 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:50 Download gff for BO27974.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ej-RA 13..306 17..312 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:40 Download gff for BO27974.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ej-RA 13..306 17..312 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:40 Download gff for BO27974.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15660643..15660707 249..312 96 <- Minus
3L 15660772..15661003 17..248 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:50 Download gff for BO27974.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15653743..15653807 249..312 96 <- Minus
arm_3L 15653872..15654103 17..248 100   Minus

BO27974.pep Sequence

Translation from 16 to 328

> BO27974.pep
MRYLCVFSLTLILCCLSIKAQSLNCTRLRENCRPCTRRLVDPINDLEFIN
SDCREKLRGRWIWRDVRRCDMQIVACENHETRLDCENVARLTGMRRIRAS
FLDH

BO27974.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:26
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ej-PA 98 CG7588-PA 1..98 1..98 536 100 Plus
Eig71Ef-PA 98 CG7599-PA 1..96 1..96 272 47.9 Plus
Eig71Eh-PB 101 CG7594-PB 9..95 11..97 194 35.6 Plus
Eig71Ed-PA 99 CG7350-PA 1..98 1..97 163 32.7 Plus
Eig71Ea-PA 100 CG16931-PA 1..99 1..98 159 31.3 Plus