BO27978.complete Sequence
958 bp assembled on 2011-06-17
GenBank Submission: KX797924
> BO27978.complete
GAAGTTATCAGTCGACATGCTGCTGTGTCGCGTTGTGCTGGCACTGCTGC
TGCTGGTGCTACTCCACTACTGCCAGGCGAAGGATGAAGGTGAAACCACA
CAGCGTGGAGCAGTGCTGGTCTCACTGACTGAGAACATGGCCAAATCGGC
AGGATCGCAGCTCGTCCAAGCCGATCCCTTCATCTCGCGCAACCAGAAGC
AGTGCTTTGAGACCCGCAGTCTGGTGTCCTGCATCAAGTACAAGACCAGC
AAATTGATCTGGAAACTGGCCACTAACAGCATGGGCTTCTTCCCCAGCGA
GTACGGGCGCGATCTGGCCGGGGACAGAGGCCGCTGGCTGAGATTAGTCC
AGTTGGGCGAGCCCGCCGATGAGGTGGTCGTGTTCAACGACGCTAAGAGC
TTAGAAGGTGACAGTGAACTGACGATGATTCTCAAGTTCCTGAAAAGGGC
AATGGAGACGTTTGGGCGAAACCACGGACTCCAACTGAGGCTGAACAGCG
AGGGTGGAGCGAGAGTCATGGAGGAATCGGAAGCACGATTGAAGCGCAAG
AAGAAGAAGTGGCTCATTATCCTGCCCCTCGTCATTCTGATGAAGATTGC
CCACCTGAAGATGACTTTGGTGAGCATGCTGATGGGCGTGCTCGGCATGA
ACGTGCTGCTGGTCGGCGGCGTGGGCTGGCTGATCCACTACCTTAAGTAC
AAGACCATGTGCAAGATCCACCCGCATCTGGTGCAGACGCACTCGCACGT
CTACGAGTCAGATCCCTCGGACTACTCCCAGTTCGTGGGCAGCGGTAGCT
ACTCCAACTCGTACTCCCCGTACAGCTCCGGATCGGGGGCTCCTCACGAG
TTGGGCGGCAATAGCTACAGCAAGGACTGGGCCACGAGTAAGGCCTACAA
CGCGCACAACTATCTTGACACGATCAGCAAGCGGATACAGGCAAGCTTTC
TAGACCAT
BO27978.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi1-RA | 927 | CG15585-PA | 1..924 | 17..940 | 4620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:01:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi1-RA | 1161 | CG15585-RA | 95..1020 | 15..940 | 4630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:01:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6174420..6174830 | 530..940 | 2055 | 100 | Plus |
3R | 32079331 | 3R | 6173643..6174038 | 15..410 | 1980 | 100 | Plus |
3R | 32079331 | 3R | 6174233..6174359 | 404..530 | 635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:01:41 has no hits.
BO27978.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:05 Download gff for
BO27978.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi1-RA | 1..924 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:01 Download gff for
BO27978.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi1-RA | 97..1020 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:58 Download gff for
BO27978.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi1-RA | 97..1020 | 17..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:58 Download gff for
BO27978.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6173645..6174035 | 17..407 | 100 | -> | Plus |
3R | 6174237..6174359 | 408..530 | 100 | -> | Plus |
3R | 6174421..6174830 | 531..942 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:01 Download gff for
BO27978.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1999367..1999757 | 17..407 | 100 | -> | Plus |
arm_3R | 1999959..2000081 | 408..530 | 100 | -> | Plus |
arm_3R | 2000143..2000552 | 531..942 | 99 | | Plus |
BO27978.pep Sequence
Translation from 16 to 958
> BO27978.pep
MLLCRVVLALLLLVLLHYCQAKDEGETTQRGAVLVSLTENMAKSAGSQLV
QADPFISRNQKQCFETRSLVSCIKYKTSKLIWKLATNSMGFFPSEYGRDL
AGDRGRWLRLVQLGEPADEVVVFNDAKSLEGDSELTMILKFLKRAMETFG
RNHGLQLRLNSEGGARVMEESEARLKRKKKKWLIILPLVILMKIAHLKMT
LVSMLMGVLGMNVLLVGGVGWLIHYLKYKTMCKIHPHLVQTHSHVYESDP
SDYSQFVGSGSYSNSYSPYSSGSGAPHELGGNSYSKDWATSKAYNAHNYL
DTISKRIQASFLDH
BO27978.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi1-PA | 308 | CG15585-PA | 1..308 | 1..308 | 1593 | 100 | Plus |