BO27981.complete Sequence
340 bp assembled on 2011-06-21
GenBank Submission: KX797209
> BO27981.complete
GAAGTTATCAGTCGACATGTTAAAACTTTTGCTGCCATTAGCTATTGTGT
GCCTGTTTATGGCTCACATACAAGCCAATCCCGAAGAAGCTAACAGGCGT
CATAAAATCTGCATTCGCACCTACGATAAGTGTATTGAAAATGAAGCTAG
GTTGGGAAAACAGGACGATACTTCAAAGTTCTTTAACGACTACTGTCGCC
GTTCGGATTCTGGATGGTCAGATGTTAGCCGATGTGATCTTCTGCGAATA
GCCTGTTTATCTACTGTGCGCGATTGCGAAACACCGACTTGCAAGAATGT
TGCCCACCGCATGCGTCTTTGGGCAAGCTTTCTAGACCAT
BO27981.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:17:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ei-RB | 309 | CG7327-PB | 1..306 | 17..322 | 1530 | 100 | Plus |
Eig71Ei-RA | 309 | CG7327-PA | 1..306 | 17..322 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:17:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ei-RB | 530 | CG7327-RB | 35..341 | 16..322 | 1535 | 100 | Plus |
Eig71Ei-RA | 393 | CG7327-RA | 35..341 | 16..322 | 1535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:17:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15659819..15660039 | 40..260 | 1105 | 100 | Plus |
3L | 28110227 | 3L | 15660101..15660162 | 261..322 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:17:23 has no hits.
BO27981.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 11:15:29 Download gff for
BO27981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ei-RA | 41..341 | 22..324 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:57 Download gff for
BO27981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ei-RA | 41..341 | 22..324 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:19 Download gff for
BO27981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ei-RA | 41..341 | 22..324 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:19 Download gff for
BO27981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15659747..15659766 | 22..41 | 100 | -> | Plus |
3L | 15659821..15660039 | 42..260 | 100 | -> | Plus |
3L | 15660101..15660162 | 261..324 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:57 Download gff for
BO27981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15652847..15652866 | 22..41 | 100 | -> | Plus |
arm_3L | 15652921..15653139 | 42..260 | 100 | -> | Plus |
arm_3L | 15653201..15653262 | 261..324 | 96 | | Plus |
BO27981.pep Sequence
Translation from 16 to 340
> BO27981.pep
MLKLLLPLAIVCLFMAHIQANPEEANRRHKICIRTYDKCIENEARLGKQD
DTSKFFNDYCRRSDSGWSDVSRCDLLRIACLSTVRDCETPTCKNVAHRMR
LWASFLDH
BO27981.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ei-PB | 102 | CG7327-PB | 1..102 | 1..102 | 557 | 100 | Plus |
Eig71Ei-PA | 102 | CG7327-PA | 1..102 | 1..102 | 557 | 100 | Plus |
Eig71Eg-PA | 98 | CG7336-PA | 1..97 | 1..100 | 193 | 37 | Plus |
Eig71Eb-PB | 95 | CG7355-PB | 1..89 | 1..95 | 171 | 35.8 | Plus |
Eig71Eb-PA | 95 | CG7355-PA | 1..89 | 1..95 | 171 | 35.8 | Plus |