Clone BO27981 Report

Search the DGRC for BO27981

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:279
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptEig71Ei-RA
Protein status:BO27981.pep: Imported from assembly
Sequenced Size:340

Clone Sequence Records

BO27981.complete Sequence

340 bp assembled on 2011-06-21

GenBank Submission: KX797209

> BO27981.complete
GAAGTTATCAGTCGACATGTTAAAACTTTTGCTGCCATTAGCTATTGTGT
GCCTGTTTATGGCTCACATACAAGCCAATCCCGAAGAAGCTAACAGGCGT
CATAAAATCTGCATTCGCACCTACGATAAGTGTATTGAAAATGAAGCTAG
GTTGGGAAAACAGGACGATACTTCAAAGTTCTTTAACGACTACTGTCGCC
GTTCGGATTCTGGATGGTCAGATGTTAGCCGATGTGATCTTCTGCGAATA
GCCTGTTTATCTACTGTGCGCGATTGCGAAACACCGACTTGCAAGAATGT
TGCCCACCGCATGCGTCTTTGGGCAAGCTTTCTAGACCAT

BO27981.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ei-RB 309 CG7327-PB 1..306 17..322 1530 100 Plus
Eig71Ei-RA 309 CG7327-PA 1..306 17..322 1530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:17:25
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ei-RB 530 CG7327-RB 35..341 16..322 1535 100 Plus
Eig71Ei-RA 393 CG7327-RA 35..341 16..322 1535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15659819..15660039 40..260 1105 100 Plus
3L 28110227 3L 15660101..15660162 261..322 310 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:17:23 has no hits.

BO27981.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 11:15:29 Download gff for BO27981.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ei-RA 41..341 22..324 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:57 Download gff for BO27981.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ei-RA 41..341 22..324 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:19 Download gff for BO27981.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ei-RA 41..341 22..324 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:19 Download gff for BO27981.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15659747..15659766 22..41 100 -> Plus
3L 15659821..15660039 42..260 100 -> Plus
3L 15660101..15660162 261..324 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:57 Download gff for BO27981.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15652847..15652866 22..41 100 -> Plus
arm_3L 15652921..15653139 42..260 100 -> Plus
arm_3L 15653201..15653262 261..324 96   Plus

BO27981.pep Sequence

Translation from 16 to 340

> BO27981.pep
MLKLLLPLAIVCLFMAHIQANPEEANRRHKICIRTYDKCIENEARLGKQD
DTSKFFNDYCRRSDSGWSDVSRCDLLRIACLSTVRDCETPTCKNVAHRMR
LWASFLDH

BO27981.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:00
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ei-PB 102 CG7327-PB 1..102 1..102 557 100 Plus
Eig71Ei-PA 102 CG7327-PA 1..102 1..102 557 100 Plus
Eig71Eg-PA 98 CG7336-PA 1..97 1..100 193 37 Plus
Eig71Eb-PB 95 CG7355-PB 1..89 1..95 171 35.8 Plus
Eig71Eb-PA 95 CG7355-PA 1..89 1..95 171 35.8 Plus