BO27983.complete Sequence
550 bp assembled on 2011-06-21
GenBank Submission: KX798809
> BO27983.complete
GAAGTTATCAGTCGACATGAAGTTGACAAAGTTATGGTTGCTTTTTGTGT
GCCTGGGGCTTTTCGTTACCCTGGTTGTGAGTGCCGATACGGACTCGGAT
GCCGATTCGGATTCATCCGCCGATTCGGATTCATCCGCCGATTCCGATGA
GAATACAACCGCATCCGGATCGATAGTAACCTCAACCACGGAGTCCAGTG
CCACGAACAGTTCCGGTTCCTCAGATGATGCTTCTGGCAGTAGTTCCGAT
GTGGACGATGGTTCCGATGATGATACTGATTCTGGATCCGATACGGATTA
TGATACACCTACTACAGCTCCAGTTGTTAAAAAGAGGGCCAATAGGAAGA
AGGCTAACAATAACAAGAAGAGAGCTAGCAACAATAGGAAGAAGGCCAAC
AATAACAACAACAACAAGAAGAGGGCCAACAGCAACAACAATCGCAAAAG
GAGGGCGTCCAACAACAACAATAAAAAGAAGGCATCCAACAACAACAACA
GGCGCAGGAACAACAATTCCAGGAGGCGTGGTGCAAGCTTTCTAGACCAT
BO27983.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:20:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pig1-RB | 519 | CG10790-PB | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:20:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pig1-RB | 690 | CG10790-RB | 51..572 | 11..532 | 2595 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:20:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3248718..3249239 | 532..11 | 2595 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:20:04 has no hits.
BO27983.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 12:01:38 Download gff for
BO27983.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 57..572 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:32 Download gff for
BO27983.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 57..572 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:11 Download gff for
BO27983.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 57..572 | 17..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:11 Download gff for
BO27983.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3248716..3249233 | 17..534 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:32 Download gff for
BO27983.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3142749..3143266 | 17..534 | 99 | | Minus |
BO27983.pep Sequence
Translation from 16 to 550
> BO27983.pep
MKLTKLWLLFVCLGLFVTLVVSADTDSDADSDSSADSDSSADSDENTTAS
GSIVTSTTESSATNSSGSSDDASGSSSDVDDGSDDDTDSGSDTDYDTPTT
APVVKKRANRKKANNNKKRASNNRKKANNNNNNKKRANSNNNRKRRASNN
NNKKKASNNNNRRRNNNSRRRGASFLDH
BO27983.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pig1-PB | 172 | CG10790-PB | 1..172 | 1..172 | 874 | 100 | Plus |
| CG17362-PB | 153 | CG17362-PB | 4..152 | 8..166 | 188 | 34.8 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 285..440 | 22..168 | 165 | 25.6 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 285..440 | 22..168 | 165 | 25.6 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 283..429 | 24..168 | 161 | 21.8 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 283..429 | 24..168 | 161 | 21.8 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 304..469 | 22..174 | 153 | 24.1 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 304..469 | 22..174 | 153 | 24.1 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 343..474 | 22..152 | 149 | 23.5 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 343..474 | 22..152 | 149 | 23.5 | Plus |
| CG14852-PA | 174 | CG14852-PA | 6..167 | 9..169 | 141 | 26.8 | Plus |
