BO27984.complete Sequence
1588 bp assembled on 2011-10-14
GenBank Submission: KX799238
> BO27984.complete
GAAGTTATCAGTCGACATGTGGATCATTTTCCTCATCATCGGATTGCTGG
TGCTCGGGCTGCTGGTTCTGCTAATTATTGCGGCGCGGTATCAGCGAGAT
TATTGGCGCTATCTGGACATTCCACACGAGAGACCCAAAAAGCTATGGCC
TATCATTAGGCAAATAATGACGCAGACATTGAGTACGGAGGCTATGAAGG
CGGAGCACTACTCGGCCATATACAAGAAGTTCAAGGGAAGCGGTCCCTTC
TGCGGATTCTACGCCCTGTTGCAGCCACGCGCATTGATCCTCGATCGGGA
GCTGATTAGGCAAATAATGATCAAGGACTTTTGGAACTTTAATGATCGAG
GATTGTATTGCAATCAAAAGTCGGATCCTTTGTCGGGTGATCTGTACGCT
TTGCGGGGAGAGAGCTGGAAGGAGATGCGTCAGAAATTGGATCCAAGTCT
CGAAGGTGATCGCATGTCCTTGCTGTATGACTGCCTGTACGAGGAGGCGG
AACAGCTTCTCTTGACAGTCAATAGCACCCTAATGAGCCAGCCCCATTCC
ACCGTTCACATACAAAAGATTATGAGGCGTTATGTGCTGTCTTCGTTGGC
CAAATGCGTTTTTGGTTTGAATGCCGAACAGAGGAAAACGTATCCTCTGG
AGGATTTTGAGCAGATGACCGAGCTGGCCTTGAATAGCCACAAACATGGC
TACCTAATGAACCTGATGATGATCCGGTTCCCCAACTTTTGTCGAATGTT
GCGCATGCGTCGCACGCCCAAACAGGCGGAGGAGTATTTTATTAAGCTCC
TTACGAGTATTGTGGAACAACGAGAGACGTCCGGAAAGCCTCAGAAGGAC
TACTTACAACTTTTGATCGACGTCAAGGCACTGGAGTTTATTACCCACCA
GTATGAAGCGGATAAGGAACTAGGTGCCCATCTGCAGAACGAGTTGGCCG
CCCATGCAGTTGTCTTCTTGAAGGCGGGCTACGAGCAAACGGCCAACACT
CTATCATATGTACTCTATGAGCTAGCATTGCATCCAGAATTGCAAGTACG
TGTGCGGGAGGAGGTCAAGAAGGCCATCGAGCGACATGATGGTCACATAA
CACATGAGGGCATTAAGTCGCTTAGTTTCATGGGTCAGGTGATCAACGAA
ACACTACGAATGCATCCCATAACACCCTACATCCTACGTCGCACCTTAAA
TGACTACGCAGTTCCGGATCATCCCAAGTACATTCTGGTCAAGGAGCTGT
TCCTCATCATACCCACGCACGCTATCCATCACGATCCGGATATCTATCCG
GATCCCGAGGAATTCAAGCCGGATCGTTGGAGCGGACCACGGGATTCGCT
GCAGGAGCAGGGCACTTGGTTTGGATTCGGCGTGGGTGCTCGCAGTTGCA
TTGGTATACAATTCGCACAGCTGCAACTGCGATTGGCATTGGCTCTGCTT
CTATCCGAGTATGAATTCTCCTTGAATACCAGGAAACCACTGATTAACCT
GGAGGATGGTATAGCACTAACCCTGATGCCATTGGGTGTCATAGAACCCG
GAAACGAGGAGAGGGCGGTAGCAAGCTTTCTAGACCAT
BO27984.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:40:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp317a1-RC | 1557 | CG17453-PC | 1..1554 | 17..1570 | 7770 | 100 | Plus |
| Cyp317a1-RB | 1557 | CG17453-PB | 1..1554 | 17..1570 | 7770 | 100 | Plus |
| Cyp317a1-RA | 1557 | CG17453-PA | 1..1554 | 17..1570 | 7770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:40:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp317a1-RC | 3904 | CG17453-RC | 302..1857 | 15..1570 | 7780 | 100 | Plus |
| Cyp317a1-RB | 2078 | CG17453-RB | 476..2031 | 15..1570 | 7780 | 100 | Plus |
| Cyp317a1-RA | 1904 | CG17453-RA | 302..1857 | 15..1570 | 7780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:40:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14899493..14901048 | 15..1570 | 7780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:40:14 has no hits.
BO27984.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-14 10:57:03 Download gff for
BO27984.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp317a1-RA | 1..1554 | 17..1572 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:33:10 Download gff for
BO27984.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp317a1-RA | 304..1857 | 17..1572 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:39:10 Download gff for
BO27984.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp317a1-RA | 304..1857 | 17..1572 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:39:10 Download gff for
BO27984.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14899495..14901048 | 17..1572 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:33:10 Download gff for
BO27984.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10787000..10788553 | 17..1572 | 99 | | Plus |
BO27984.pep Sequence
Translation from 16 to 1588
> BO27984.pep
MWIIFLIIGLLVLGLLVLLIIAARYQRDYWRYLDIPHERPKKLWPIIRQI
MTQTLSTEAMKAEHYSAIYKKFKGSGPFCGFYALLQPRALILDRELIRQI
MIKDFWNFNDRGLYCNQKSDPLSGDLYALRGESWKEMRQKLDPSLEGDRM
SLLYDCLYEEAEQLLLTVNSTLMSQPHSTVHIQKIMRRYVLSSLAKCVFG
LNAEQRKTYPLEDFEQMTELALNSHKHGYLMNLMMIRFPNFCRMLRMRRT
PKQAEEYFIKLLTSIVEQRETSGKPQKDYLQLLIDVKALEFITHQYEADK
ELGAHLQNELAAHAVVFLKAGYEQTANTLSYVLYELALHPELQVRVREEV
KKAIERHDGHITHEGIKSLSFMGQVINETLRMHPITPYILRRTLNDYAVP
DHPKYILVKELFLIIPTHAIHHDPDIYPDPEEFKPDRWSGPRDSLQEQGT
WFGFGVGARSCIGIQFAQLQLRLALALLLSEYEFSLNTRKPLINLEDGIA
LTLMPLGVIEPGNEERAVASFLDH
BO27984.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:31:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp317a1-PC | 518 | CG17453-PC | 1..518 | 1..518 | 2707 | 100 | Plus |
| Cyp317a1-PB | 518 | CG17453-PB | 1..518 | 1..518 | 2707 | 100 | Plus |
| Cyp317a1-PA | 518 | CG17453-PA | 1..518 | 1..518 | 2707 | 100 | Plus |
| Cyp6a2-PA | 506 | CG9438-PA | 1..476 | 4..486 | 807 | 34.1 | Plus |
| Cyp6a9-PB | 504 | CG10246-PB | 3..474 | 4..486 | 781 | 34 | Plus |
