BO27993.complete Sequence
280 bp assembled on 2011-06-17
GenBank Submission: KX795906
> BO27993.complete
GAAGTTATCAGTCGACATGAGAAAGGTCGTGTTAATTTGCTTACTAGCGA
GATTTAGCATCGGATTTCCCCAGGCTCACATATACAAGCCACTTCTTTGT
GAGGAAACCAATGCTAATATAACCAGATCTTCGCTTCTTGCACAATGTGT
AAATCAGGACGAATGTTTTATAAACAGACCAGTAGGTCTATGCCCCAAAC
TTGAAGTTTGCTGCGTTAAAAAACAAGATTTTAACATTGACGAGGTTGAA
TATATGGAAGATGCAAGCTTTCTAGACCAT
BO27993.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:51:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp77F-RB | 249 | CG42482-PB | 1..246 | 17..262 | 1230 | 100 | Plus |
Sfp77F-RA | 249 | CG42482-PA | 1..246 | 17..262 | 1230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:51:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp77F-RB | 1093 | CG42482-RB | 20..265 | 17..262 | 1230 | 100 | Plus |
Sfp77F-RA | 319 | CG42482-RA | 20..265 | 17..262 | 1230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:51:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20897096..20897262 | 262..96 | 835 | 100 | Minus |
3L | 28110227 | 3L | 20897320..20897398 | 95..17 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:51:38 has no hits.
BO27993.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:42 Download gff for
BO27993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp77F-RA | 1..246 | 17..264 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:15 Download gff for
BO27993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp77F-RA | 20..265 | 17..264 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:38 Download gff for
BO27993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp77F-RA | 20..265 | 17..264 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:38 Download gff for
BO27993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20897094..20897262 | 96..264 | 98 | <- | Minus |
3L | 20897320..20897398 | 17..95 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:15 Download gff for
BO27993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20890194..20890362 | 96..264 | 98 | <- | Minus |
arm_3L | 20890420..20890498 | 17..95 | 100 | | Minus |
BO27993.pep Sequence
Translation from 16 to 280
> BO27993.pep
MRKVVLICLLARFSIGFPQAHIYKPLLCEETNANITRSSLLAQCVNQDEC
FINRPVGLCPKLEVCCVKKQDFNIDEVEYMEDASFLDH
BO27993.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:29:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp77F-PB | 82 | CG42482-PB | 1..82 | 1..82 | 439 | 100 | Plus |
Sfp77F-PA | 82 | CG42482-PA | 1..82 | 1..82 | 439 | 100 | Plus |