BO27994.complete Sequence
643 bp assembled on 2011-06-29
GenBank Submission: KX798755
> BO27994.complete
GAAGTTATCAGTCGACATGAGAATCATAACAGTCCTGTCTGTTTCGCTCT
TGGTGGGTCTTGTGGCCATAAGCCAGGCAGACGACAGTAGTCCAGGATTC
TTCCTAAAGATCACCAAGAACGTACCGCGGCTGGGCAAGCGAGGCGAGAA
CTTTGCCATAAAGAACCTAAAGACCATTCCTCGCATAGGACGCAGTGAGC
ACAGCTCTGTTACTCCTCTGCTGGCGTGGCTATGGGATTTGGAAACGAGT
CCAAGCAAGCGGCGCTTACCCGCAGGGGAATCCCCAGCGAAGGAGCAGGA
ACTTAACGTGGTGCAGCCCGTCAACTCGAATACGCTCCTTGAGCTGCTTG
ACAACAACGCTATTCCCAGCGAGCAGGTGAAGTTCGTCCACTGGAAGGAT
TTCGATCGTGCCCTCCAGGCAGATGCCGATCTGTACAGCAAGGTTATCCA
GCTGGGACGCCGTCCGGACCAGCACCTCAAGCAGACTCTCAGCTTTGGCA
GCTTCGTTCCCATCTTCGGCGACGAGCAGAATCCGGACTTTATGATGTAC
AAAAACAACGAGGATCAGGAACTTTACGGCGGGGGAAATCGCTACGATCG
CCAATTCCTCAAGTACAACATCCTGGCAAGCTTTCTAGACCAT
BO27994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ETH-RA | 612 | CG18105-PA | 1..609 | 17..625 | 3045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ETH-RA | 755 | CG18105-RA | 24..633 | 16..625 | 3050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24794792..24795214 | 625..203 | 2115 | 100 | Minus |
2R | 25286936 | 2R | 24795273..24795459 | 202..16 | 935 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:30:47 has no hits.
BO27994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-29 12:27:08 Download gff for
BO27994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ETH-RA | 1..609 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:02:48 Download gff for
BO27994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ETH-RA | 25..633 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:53 Download gff for
BO27994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ETH-RA | 25..633 | 17..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:53 Download gff for
BO27994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24794789..24795214 | 203..627 | 99 | <- | Minus |
2R | 24795273..24795458 | 17..202 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:02:48 Download gff for
BO27994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20682312..20682737 | 203..627 | 99 | <- | Minus |
arm_2R | 20682796..20682981 | 17..202 | 100 | | Minus |
BO27994.pep Sequence
Translation from 16 to 643
> BO27994.pep
MRIITVLSVSLLVGLVAISQADDSSPGFFLKITKNVPRLGKRGENFAIKN
LKTIPRIGRSEHSSVTPLLAWLWDLETSPSKRRLPAGESPAKEQELNVVQ
PVNSNTLLELLDNNAIPSEQVKFVHWKDFDRALQADADLYSKVIQLGRRP
DQHLKQTLSFGSFVPIFGDEQNPDFMMYKNNEDQELYGGGNRYDRQFLKY
NILASFLDH
BO27994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:54:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ETH-PA | 203 | CG18105-PA | 1..203 | 1..203 | 1049 | 100 | Plus |