BO28059.complete Sequence
1201 bp assembled on 2011-07-18
GenBank Submission: KX796495
> BO28059.complete
GAAGTTATCAGTCGACATGAAGATCTACCAGGATATATATCCTATATCCA
AGCCCTCGCAGATCTTTGCTATATTACCATTCTATAGTGGAGACGTCGAT
GATGGCTTTCGCTTTGGAGGATTGGGTCGCTGGTACGGACGACTGGTGGC
CCTGATTATACTAATCGGATCACTGACATTGGGGGAAGATGTGCTCTTCG
CCTCCAAGGAGTACAGATTGGTGGCCAGTGCCCAAGGTGATACCGAGGAG
ATCAACAGGACCATCGAGACGCTTCTGTGTATCATCAGCTATACCATGGT
GGTATTATCGAGTGTGCAGAATGCATCCAGACACTTTCGCACTCTTCACG
ATATTGCCAAAATCGATGAGTATCTGCTGGCCAATGGATTCCGGGAAACC
TACAGTTGTCGCAATCTGACCATTCTGGTCACCTCTGCAGCAGGCGGTGT
CCTCGCTGTGGCCTTCTACTATATTCACTATCGAAGTGGCATTGGTGCCA
AAAGGCAAATCATCCTGCTTCTGATCTACTTCCTCCAACTGCTGTACTCC
ACTCTCCTGGCCTTATATCTAAGGACACTCATGATGAATTTGGCACAGAG
AATTGGATTTCTTAACCAGAAACTGGATACGTTTAATCTTCAGGATTGTG
GCCACATGGAAAACTGGCGTGAGTTGAGCAACCTCATAGAGGTCCTTTGC
AAATTCCGCTACATCACCGAGAATATTAACTGCGTGGCCGGAGTTTCATT
GCTATTCTACTTTGGCTTCTCCTTCTACACGGTCACAAATCAGAGTTACT
TGGCCTTTGCCACATTGACAGCCGGCTCGTTGAGTTCCAAAACAGAAGTG
GCTGATACCATAGGACTATCATGTATCTGGGTTTTGGCTGAAACTATCAC
AATGATTGTGATTTGCAGCGCATGTGACGGCCTGGCATCCGAGGTGAATG
GCACGGCACAGATCCTGGCGAGAATTTACGGCAAGAGCAAGCAGTTCCAG
AACCTCATCGACAAGTTCCTAACGAAGAGCATCAAACAGGATCTTCAGTT
CACCGCCTACGGATTCTTTTCCATAGACAACTCAACACTCTTCAAGATCT
TCTCGGCTGTTACTACCTATCTGGTGATTCTCATTCAATTCAAGCAGTTG
GAGGACTCCAAGGTGGAAGACATTAGTCAGGCAGCAAGCTTTCTAGACCA
T
BO28059.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:39:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gr68a-RA | 1170 | CG7303-PA | 1..1167 | 17..1183 | 5835 | 100 | Plus |
Gr32a-RA | 1386 | CG14916-PA | 1192..1352 | 998..1158 | 265 | 77.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:39:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gr68a-RA | 1170 | CG7303-RA | 1..1167 | 17..1183 | 5835 | 100 | Plus |
Gr32a-RA | 1623 | CG14916-RA | 1361..1521 | 998..1158 | 265 | 77.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:39:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11751300..11752471 | 12..1183 | 5845 | 99.9 | Plus |
2L | 23513712 | 2L | 11115502..11115585 | 1013..1096 | 195 | 82.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:39:52 has no hits.
BO28059.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-18 15:33:48 Download gff for
BO28059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr68a-RA | 1..1167 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:32:59 Download gff for
BO28059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr68a-RA | 1..1167 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:59 Download gff for
BO28059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr68a-RA | 1..1167 | 17..1185 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:38:59 Download gff for
BO28059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11751305..11752471 | 17..1185 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:32:59 Download gff for
BO28059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11744405..11745571 | 17..1185 | 99 | | Plus |
BO28059.pep Sequence
Translation from 16 to 1201
> BO28059.pep
MKIYQDIYPISKPSQIFAILPFYSGDVDDGFRFGGLGRWYGRLVALIILI
GSLTLGEDVLFASKEYRLVASAQGDTEEINRTIETLLCIISYTMVVLSSV
QNASRHFRTLHDIAKIDEYLLANGFRETYSCRNLTILVTSAAGGVLAVAF
YYIHYRSGIGAKRQIILLLIYFLQLLYSTLLALYLRTLMMNLAQRIGFLN
QKLDTFNLQDCGHMENWRELSNLIEVLCKFRYITENINCVAGVSLLFYFG
FSFYTVTNQSYLAFATLTAGSLSSKTEVADTIGLSCIWVLAETITMIVIC
SACDGLASEVNGTAQILARIYGKSKQFQNLIDKFLTKSIKQDLQFTAYGF
FSIDNSTLFKIFSAVTTYLVILIQFKQLEDSKVEDISQAASFLDH
BO28059.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:58:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gr68a-PA | 389 | CG7303-PA | 1..389 | 1..389 | 1966 | 100 | Plus |
Gr32a-PA | 461 | CG14916-PA | 124..455 | 75..385 | 471 | 38.3 | Plus |
Gr39a-PA | 371 | CG31622-PA | 103..364 | 111..381 | 225 | 26.5 | Plus |
Gr39a-PD | 381 | CG31622-PD | 147..374 | 150..381 | 220 | 26.7 | Plus |
Gr39a-PC | 381 | CG31622-PC | 224..374 | 219..381 | 199 | 31.3 | Plus |