Clone BO28059 Report

Search the DGRC for BO28059

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:280
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptGr68a-RA
Protein status:BO28059.pep: Imported from assembly
Sequenced Size:1201

Clone Sequence Records

BO28059.complete Sequence

1201 bp assembled on 2011-07-18

GenBank Submission: KX796495

> BO28059.complete
GAAGTTATCAGTCGACATGAAGATCTACCAGGATATATATCCTATATCCA
AGCCCTCGCAGATCTTTGCTATATTACCATTCTATAGTGGAGACGTCGAT
GATGGCTTTCGCTTTGGAGGATTGGGTCGCTGGTACGGACGACTGGTGGC
CCTGATTATACTAATCGGATCACTGACATTGGGGGAAGATGTGCTCTTCG
CCTCCAAGGAGTACAGATTGGTGGCCAGTGCCCAAGGTGATACCGAGGAG
ATCAACAGGACCATCGAGACGCTTCTGTGTATCATCAGCTATACCATGGT
GGTATTATCGAGTGTGCAGAATGCATCCAGACACTTTCGCACTCTTCACG
ATATTGCCAAAATCGATGAGTATCTGCTGGCCAATGGATTCCGGGAAACC
TACAGTTGTCGCAATCTGACCATTCTGGTCACCTCTGCAGCAGGCGGTGT
CCTCGCTGTGGCCTTCTACTATATTCACTATCGAAGTGGCATTGGTGCCA
AAAGGCAAATCATCCTGCTTCTGATCTACTTCCTCCAACTGCTGTACTCC
ACTCTCCTGGCCTTATATCTAAGGACACTCATGATGAATTTGGCACAGAG
AATTGGATTTCTTAACCAGAAACTGGATACGTTTAATCTTCAGGATTGTG
GCCACATGGAAAACTGGCGTGAGTTGAGCAACCTCATAGAGGTCCTTTGC
AAATTCCGCTACATCACCGAGAATATTAACTGCGTGGCCGGAGTTTCATT
GCTATTCTACTTTGGCTTCTCCTTCTACACGGTCACAAATCAGAGTTACT
TGGCCTTTGCCACATTGACAGCCGGCTCGTTGAGTTCCAAAACAGAAGTG
GCTGATACCATAGGACTATCATGTATCTGGGTTTTGGCTGAAACTATCAC
AATGATTGTGATTTGCAGCGCATGTGACGGCCTGGCATCCGAGGTGAATG
GCACGGCACAGATCCTGGCGAGAATTTACGGCAAGAGCAAGCAGTTCCAG
AACCTCATCGACAAGTTCCTAACGAAGAGCATCAAACAGGATCTTCAGTT
CACCGCCTACGGATTCTTTTCCATAGACAACTCAACACTCTTCAAGATCT
TCTCGGCTGTTACTACCTATCTGGTGATTCTCATTCAATTCAAGCAGTTG
GAGGACTCCAAGGTGGAAGACATTAGTCAGGCAGCAAGCTTTCTAGACCA
T

BO28059.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:39:52
Subject Length Description Subject Range Query Range Score Percent Strand
Gr68a-RA 1170 CG7303-PA 1..1167 17..1183 5835 100 Plus
Gr32a-RA 1386 CG14916-PA 1192..1352 998..1158 265 77.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:39:53
Subject Length Description Subject Range Query Range Score Percent Strand
Gr68a-RA 1170 CG7303-RA 1..1167 17..1183 5835 100 Plus
Gr32a-RA 1623 CG14916-RA 1361..1521 998..1158 265 77.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:39:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11751300..11752471 12..1183 5845 99.9 Plus
2L 23513712 2L 11115502..11115585 1013..1096 195 82.1 Plus
Blast to na_te.dros performed on 2014-11-26 21:39:52 has no hits.

BO28059.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-18 15:33:48 Download gff for BO28059.complete
Subject Subject Range Query Range Percent Splice Strand
Gr68a-RA 1..1167 17..1185 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:32:59 Download gff for BO28059.complete
Subject Subject Range Query Range Percent Splice Strand
Gr68a-RA 1..1167 17..1185 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:59 Download gff for BO28059.complete
Subject Subject Range Query Range Percent Splice Strand
Gr68a-RA 1..1167 17..1185 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:38:59 Download gff for BO28059.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11751305..11752471 17..1185 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:32:59 Download gff for BO28059.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11744405..11745571 17..1185 99   Plus

BO28059.pep Sequence

Translation from 16 to 1201

> BO28059.pep
MKIYQDIYPISKPSQIFAILPFYSGDVDDGFRFGGLGRWYGRLVALIILI
GSLTLGEDVLFASKEYRLVASAQGDTEEINRTIETLLCIISYTMVVLSSV
QNASRHFRTLHDIAKIDEYLLANGFRETYSCRNLTILVTSAAGGVLAVAF
YYIHYRSGIGAKRQIILLLIYFLQLLYSTLLALYLRTLMMNLAQRIGFLN
QKLDTFNLQDCGHMENWRELSNLIEVLCKFRYITENINCVAGVSLLFYFG
FSFYTVTNQSYLAFATLTAGSLSSKTEVADTIGLSCIWVLAETITMIVIC
SACDGLASEVNGTAQILARIYGKSKQFQNLIDKFLTKSIKQDLQFTAYGF
FSIDNSTLFKIFSAVTTYLVILIQFKQLEDSKVEDISQAASFLDH

BO28059.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
Gr68a-PA 389 CG7303-PA 1..389 1..389 1966 100 Plus
Gr32a-PA 461 CG14916-PA 124..455 75..385 471 38.3 Plus
Gr39a-PA 371 CG31622-PA 103..364 111..381 225 26.5 Plus
Gr39a-PD 381 CG31622-PD 147..374 150..381 220 26.7 Plus
Gr39a-PC 381 CG31622-PC 224..374 219..381 199 31.3 Plus